Xanthomonas axonopodis Xac29-1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis Xac29-1 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species is notable for having four replicons, indicating a complex genomic structure that may play a role in its adaptability and survival in various environments. The organism is cataloged under several accessions in genomic databases, specifically NC_020797.1, NC_020801.1, NC_020798.1, and NC_020800.1. These accessions provide valuable resources for researchers interested in studying its genetics, physiology, and pathogenicity. In the context of its ecological role, Xanthomonas axonopodis species, including Xac29-1, are known plant pathogens that can cause significant agricultural damage. Their rod shape and flagella enable effective colonization and movement within plant tissues, facilitating infection processes. Understanding the traits of Xac29-1, such as its motility and genomic complexity, can offer insights into its interactions with host plants and the mechanisms underlying its pathogenicity. This information is crucial for developing strategies to manage diseases caused by Xanthomonas species in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
StrainXac29-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis Xac29-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis Xac29-1 plasmid pXAC64, complete sequence.

Gene Summary

Adenine Count

12033 bp

Thymine Count

12619 bp

Guanine Count

19894 bp

Cytosine Count

19572 bp

Genome Length

64118 bp

Protein-coding Genes

67 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein jXAC29_RS40755Not AvailableNegative4192523 - 419315822996.8
type ii secretion system protein xpsiXAC29_RS40760Not AvailableNegative4193155 - 419357115391.7
type ii secretion system protein xpshXAC29_RS40765Not AvailableNegative4193568 - 419407718265.2
type ii secretion system major pseudopilin gspgXAC29_RS40770Not AvailableNegative4194087 - 419451815131.2
type ii secretion system protein xpsfXAC29_RS40775Not AvailableNegative4194768 - 419598544207.5
type ii secretion system atpase gspeXAC29_RS40780Not AvailableNegative4196161 - 419788863871.2
diffusible signal factor-reguated s8 family serine peptidaseXAC29_RS40785Not AvailableNegative4198018 - 419990163400.5
beta strand repeat-containing proteinXAC29_RS40790Not AvailableNegative4200125 - 4205272159981.0
hypothetical proteinXAC29_RS49360Not AvailableNegative4205247 - 420558512956.8
diguanylate cyclaseXAC29_RS49365Not AvailableNegative4205501 - 42057438550.42

Displaying genes 3801 – 3810 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.