Xanthomonas axonopodis Xac29-1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis Xac29-1 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species is notable for having four replicons, indicating a complex genomic structure that may play a role in its adaptability and survival in various environments. The organism is cataloged under several accessions in genomic databases, specifically NC_020797.1, NC_020801.1, NC_020798.1, and NC_020800.1. These accessions provide valuable resources for researchers interested in studying its genetics, physiology, and pathogenicity. In the context of its ecological role, Xanthomonas axonopodis species, including Xac29-1, are known plant pathogens that can cause significant agricultural damage. Their rod shape and flagella enable effective colonization and movement within plant tissues, facilitating infection processes. Understanding the traits of Xac29-1, such as its motility and genomic complexity, can offer insights into its interactions with host plants and the mechanisms underlying its pathogenicity. This information is crucial for developing strategies to manage diseases caused by Xanthomonas species in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
StrainXac29-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis Xac29-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis Xac29-1 plasmid pXAC64, complete sequence.

Gene Summary

Adenine Count

12033 bp

Thymine Count

12619 bp

Guanine Count

19894 bp

Cytosine Count

19572 bp

Genome Length

64118 bp

Protein-coding Genes

67 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transketolaseXAC29_RS39955Not AvailableNegative3981334 - 398333472522.4
dicarboxylate/amino acid:cation symporterXAC29_RS39960Not AvailableNegative3983553 - 398483344999.3
batd family proteinXAC29_RS39965Not AvailableNegative3985716 - 398746461113.4
vwa domain-containing proteinXAC29_RS39970Not AvailableNegative3987461 - 398926664795.3
vwa domain-containing proteinXAC29_RS39975Not AvailableNegative3989263 - 399027037128.1
duf4381 domain-containing proteinXAC29_RS39980Not AvailableNegative3990267 - 399072817555.4
duf58 domain-containing proteinXAC29_RS39985Not AvailableNegative3990731 - 399169334178.9
aaa family atpaseXAC29_RS39990Not AvailableNegative3991714 - 399273337643.5
hypothetical proteinXAC29_RS47110Not AvailableNegative3992887 - 399366327487.6
type iv pilus secretin pilqXAC29_RS39995Not AvailableNegative3993725 - 399562667728.9

Displaying genes 3641 – 3650 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.