Xanthomonas axonopodis Xac29-1

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xanthomonas

Description

Xanthomonas axonopodis Xac29-1 is a rod-shaped bacterium characterized by the presence of flagella, which contribute to its motility. This species is notable for having four replicons, indicating a complex genomic structure that may play a role in its adaptability and survival in various environments. The organism is cataloged under several accessions in genomic databases, specifically NC_020797.1, NC_020801.1, NC_020798.1, and NC_020800.1. These accessions provide valuable resources for researchers interested in studying its genetics, physiology, and pathogenicity. In the context of its ecological role, Xanthomonas axonopodis species, including Xac29-1, are known plant pathogens that can cause significant agricultural damage. Their rod shape and flagella enable effective colonization and movement within plant tissues, facilitating infection processes. Understanding the traits of Xac29-1, such as its motility and genomic complexity, can offer insights into its interactions with host plants and the mechanisms underlying its pathogenicity. This information is crucial for developing strategies to manage diseases caused by Xanthomonas species in agricultural settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXanthomonas
SpeciesXanthomonas axonopodis
StrainXac29-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Xanthomonas axonopodis Xac29-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthomonas axonopodis Xac29-1 plasmid pXAC64, complete sequence.

Gene Summary

Adenine Count

12033 bp

Thymine Count

12619 bp

Guanine Count

19894 bp

Cytosine Count

19572 bp

Genome Length

64118 bp

Protein-coding Genes

67 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gnat family n-acetyltransferaseXAC29_RS34805Not AvailableNegative2762186 - 276264116405.8
argininosuccinate synthaseXAC29_RS34810Not AvailableNegative2762692 - 276393044903.4
n-acetylornithine carbamoyltransferaseXAC29_RS34815Not AvailableNegative2763980 - 276501138292.8
hypothetical proteinXAC29_RS34820Not AvailableNegative2765324 - 276581818521.2
cysteine--trna ligaseXAC29_RS34825Not AvailablePositive2765996 - 276742051515.0
sufe family proteinXAC29_RS34830Not AvailablePositive2767583 - 276802016146.1
mfs transporterXAC29_RS34835Not AvailablePositive2768017 - 276926743539.5
rna polymerase-binding protein dksaXAC29_RS49010Not AvailableNegative2769477 - 276983914329.6
hypothetical proteinXAC29_RS49015Not AvailablePositive2770024 - 277060217950.2
membrane protein insertion efficiency factor yiddXAC29_RS34850Not AvailablePositive2770602 - 277089510587.0

Displaying genes 2631 – 2640 of 4621 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.