Caldisalinibacter kiritimatiensis str. L21-TH-D2

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Tissierellia

Order

Tissierellales

Family

Thermohalobacteraceae

Genus

Caldisalinibacter

Description

Caldisalinibacter kiritimatiensis str. L21-TH-D2 is an anaerobic bacterium characterized by its sole replicon. The genomic data for this strain is available under the accession ARZA00000000.1. As an anaerobic organism, C. kiritimatiensis str. L21-TH-D2 thrives in environments devoid of oxygen, suggesting its adaptation to specific ecological niches where oxidative conditions are unfavorable. The presence of only one replicon indicates a streamlined genetic structure, which may facilitate efficient replication and survival in its anaerobic habitat. The ecological implications of C. kiritimatiensis str. L21-TH-D2 may include its potential role in nutrient cycling and organic matter degradation in anaerobic environments. Such bacteria are often vital in biogeochemical processes, contributing to the breakdown of complex organic materials and potentially influencing the dynamics of microbial communities in their habitats. Thus, understanding the traits of C. kiritimatiensis str. L21-TH-D2 provides insights into the diversity of anaerobic microorganisms and their functions within ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassTissierellia
OrderTissierellales
FamilyThermohalobacteraceae
GenusCaldisalinibacter
SpeciesCaldisalinibacter kiritimatiensis
StrainL21-TH-D2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Caldisalinibacter kiritimatiensis strain L21-TH-D2 NODE_365, whole

Gene Summary

Adenine Count

978487 bp

Thymine Count

969976 bp

Guanine Count

421656 bp

Cytosine Count

418079 bp

Genome Length

2788198 bp

Protein-coding Genes

2681 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL21TH_1874Not AvailablePositive1930427 - 193196558505.7
transcriptional regulator, card familyL21TH_1875Not AvailablePositive1932619 - 193309518167.5
hypothetical proteinL21TH_1876Not AvailablePositive1933298 - 193439239908.8
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseL21TH_1877Not AvailablePositive1934759 - 193546326641.4
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseL21TH_1878Not AvailablePositive1935465 - 193593817309.0
abc transporter related proteinL21TH_1879Not AvailablePositive1935987 - 193671527212.5
abc-2 type transporterL21TH_1880Not AvailablePositive1936708 - 193788343453.8
prolyl-trna synthetase, bacterial typeL21TH_1881Not AvailablePositive1938259 - 193920336437.7
prolyl-trna synthetase, bacterial typeL21TH_1882Not AvailablePositive1939211 - 193998428770.7
hypothetical proteinL21TH_1883Not AvailablePositive1940206 - 19403314874.21

Displaying genes 1871 – 1880 of 2735 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

18 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm0003657N-acetyl-D-muramate 6-phosphateC11H17NO11PChemical structure of N-acetyl-D-muramate 6-phosphateNot available
Average370.228Da
Monoisotopic370.0555681Da

Displaying 1–10 of 18 metabolites

Health Effects

No health effects information available for this bacterium.