Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium indicum |
| Strain | BiD32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 28 |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
896313 bp
Thymine Count
890938 bp
Guanine Count
1507905 bp
Cytosine Count
1492765 bp
Genome Length
4788005 bp
Protein-coding Genes
4671 genes
Non-Coding Genes
49 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBBID32_3590 | Not Available | Negative | 362322 - 362474 | 5727.94 |
| hypothetical protein | EBBID32_3600 | Not Available | Positive | 362730 - 363038 | 11915.2 |
| bores hole in peptidoglycan layer allowing type iv secretion complex assembly to occur (virb1) | EBBID32_3610 | Not Available | Positive | 363436 - 364101 | 23252.5 |
| virb2 type iv secretion fmaily protein | EBBID32_3620 | Not Available | Positive | 364123 - 364464 | 12135.5 |
| inner membrane protein forms channel for type iv secretion of t-dna complex, virb3 | EBBID32_3630 | Not Available | Positive | 364471 - 364815 | 12305.2 |
| atpase provides energy for both assembly of type iv secretion complex and secretion of t-dna complex (virb4) | EBBID32_3640 | Not Available | Positive | 364802 - 367186 | 89883.6 |
| minor pilin of type iv secretion complex, virb5 | EBBID32_3650 | Not Available | Positive | 367200 - 367913 | 25530.2 |
| hypothetical protein | EBBID32_3660 | Not Available | Positive | 367916 - 368221 | 11246.8 |
| hypothetical protein | EBBID32_3670 | Not Available | Positive | 368265 - 369281 | 35835.8 |
| lipoprotein of type iv secretion complex that spans outer membrane and periplasm, virb7 | EBBID32_3680 | Not Available | Positive | 369292 - 369612 | 10839.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

