Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Nocardioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Nocardioides |
| Species | Nocardioides dokdonensis |
| Strain | FR1436 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | sand sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607500 bp
Thymine Count
606780 bp
Guanine Count
1576761 bp
Cytosine Count
1585666 bp
Genome Length
4376707 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pup--protein ligase | I601_RS16400 | Not Available | Negative | 3470380 - 3471741 | 51951.0 |
| hypothetical protein | I601_RS16405 | Not Available | Negative | 3471804 - 3472766 | 36525.9 |
| proteasome subunit alpha | I601_RS16410 | Not Available | Negative | 3472922 - 3473725 | 28485.2 |
| proteasome subunit beta | I601_RS16415 | Not Available | Negative | 3473730 - 3474569 | 29366.8 |
| ubiquitin-like protein pup | I601_RS16420 | Not Available | Negative | 3474572 - 3474769 | 7311.2 |
| depupylase/deamidase dop | I601_RS16425 | Not Available | Negative | 3474831 - 3476339 | 56254.5 |
| class i sam-dependent methyltransferase | I601_RS16430 | Not Available | Positive | 3476381 - 3477007 | 22507.1 |
| proteasome atpase | I601_RS16435 | Not Available | Negative | 3477122 - 3478891 | 65130.4 |
| trna (adenine-n1)-methyltransferase | I601_RS16440 | Not Available | Negative | 3479102 - 3480016 | 32918.3 |
| site-2 protease family protein | I601_RS16445 | Not Available | Negative | 3480191 - 3481369 | 40657.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
