Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Nocardioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Nocardioides |
| Species | Nocardioides dokdonensis |
| Strain | FR1436 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | sand sediment |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
607500 bp
Thymine Count
606780 bp
Guanine Count
1576761 bp
Cytosine Count
1585666 bp
Genome Length
4376707 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | I601_RS08675 | Not Available | Positive | 1829997 - 1831223 | 43745.4 |
| nad-dependent epimerase/dehydratase family protein | I601_RS08685 | Not Available | Positive | 1832152 - 1833270 | 41275.9 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | I601_RS08690 | Not Available | Positive | 1833267 - 1834388 | 41845.4 |
| o-antigen ligase | I601_RS20755 | Not Available | Positive | 1834772 - 1835641 | 30682.7 |
| glycosyltransferase | I601_RS21355 | Not Available | Positive | 1836803 - 1837384 | 20466.3 |
| is3 family transposase | I601_RS08695 | Not Available | Negative | 1837624 - 1838640 | 37571.5 |
| is21-like element helper atpase istb | I601_RS08700 | Not Available | Negative | 1838707 - 1839507 | 28920.5 |
| is21 family transposase | I601_RS08705 | Not Available | Negative | 1839504 - 1840829 | 47362.1 |
| lipopolysaccharide biosynthesis protein | I601_RS20770 | Not Available | Negative | 1842058 - 1843302 | 43682.5 |
| glycosyltransferase | I601_RS20775 | Not Available | Negative | 1843634 - 1844797 | 44026.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
