Nocardioides dokdonensis FR1436

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides dokdonensis FR1436 is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This microorganism thrives optimally at a temperature of 25.0°C, indicating a preference for moderate environmental conditions. Isolated from sand sediment, N. dokdonensis FR1436 is well adapted to its habitat, suggesting a potential role in the biogeochemical processes occurring in such environments. The aerobic requirement of this bacterium may imply involvement in the degradation of organic matter within its ecosystem, contributing to nutrient cycling and soil health. Further studies on N. dokdonensis FR1436 could elucidate its specific metabolic pathways and interactions with other microorganisms in sandy sediment habitats, potentially revealing its ecological significance in maintaining microbial diversity and functionality in these environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides dokdonensis
StrainFR1436

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
Habitatsand sediment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides dokdonensis FR1436


Gene Summary

Adenine Count

607500 bp

Thymine Count

606780 bp

Guanine Count

1576761 bp

Cytosine Count

1585666 bp

Genome Length

4376707 bp

Protein-coding Genes

4113 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinI601_RS20965Not Available+683 - 8596094.22
m48 family metalloproteaseI601_RS00005Not Available-856 - 121512885.7
hypothetical proteinI601_RS00010Not Available-1128 - 167619078.0
hypothetical proteinI601_RS00015Not Available-1824 - 217712742.7
hypothetical proteinI601_RS00020Not Available-2189 - 288726889.8
type iv secretory system conjugative dna transfer family proteinI601_RS00025Not Available-2884 - 436253378.9
hypothetical proteinI601_RS00030Not Available-4359 - 496421479.9
peptidoglycan dd-metalloendopeptidase family proteinI601_RS00035Not Available-5041 - 8184111437.0
atp-binding proteinI601_RS00040Not Available-8206 - 975356597.1
sco6880 family proteinI601_RS00045Not Available-9753 - 1125854240.9

Displaying genes 1 – 10 of 4173 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites