Idiomarinaceae bacterium HL-53

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Description

Idiomarinaceae bacterium HL-53 is a microbial organism notable for its single-replicon genomic structure. This characteristic can influence its genetic stability and adaptability within various environments. The organism is cataloged under the accession number LIHO00000000.1, which provides a reference for its genomic data and facilitates further research into its properties and potential applications. The family Idiomarinaceae is known for its members' ability to thrive in saline environments, suggesting that Idiomarinaceae bacterium HL-53 may possess specialized adaptations for osmoregulation and survival in high-salt conditions. Such traits are essential for organisms living in extreme environments, often leading to unique metabolic pathways and interactions with their ecosystems. Understanding the genetic makeup and environmental adaptations of Idiomarinaceae bacterium HL-53 can provide insights into the ecological roles of similar bacteria in saline habitats. These microorganisms may contribute to biogeochemical processes, such as nutrient cycling and organic matter degradation, in coastal and marine ecosystems. Additionally, studying the traits of this bacterium can enhance our knowledge of microbial diversity and the adaptability of life forms in extreme conditions.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Idiomarinaceae bacterium HL-53 ITZY_scaf_423, whole genome

Gene Summary

Adenine Count

705796 bp

Thymine Count

706916 bp

Guanine Count

652738 bp

Cytosine Count

624702 bp

Genome Length

2690152 bp

Protein-coding Genes

2551 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sss family solute:sodium symporterHLUCCO02_04735Not AvailableNegative1799137 - 180056751632.2
hypothetical proteinHLUCCO02_04740Not AvailableNegative1800560 - 180103917396.8
aconitate hydratase acnaHLUCCO02_04745Q9I3F5Negative1801157 - 180387198600.4
alkaline phosphodiesteraseHLUCCO02_04750O14638Positive1804102 - 180539148395.3
acyl-coa thioesterase ii tesbHLUCCO02_04755P0AGG3Positive1805388 - 180624832395.6
meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductaseHLUCCO02_04760Q9WYG0Negative1806276 - 180702826725.2
thiol:disulfide interchange protein dsbdHLUCCO02_04765P44919Positive1807183 - 180930077953.7
peroxiredoxinHLUCCO02_04770Not AvailablePositive1809337 - 180996022120.0
hypothetical proteinHLUCCO02_04775Not AvailableNegative1809997 - 181038314808.1
dmt superfamily drug/metabolite transporterHLUCCO02_04780Not AvailablePositive1810462 - 181135232683.3

Displaying genes 1751 – 1760 of 2608 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

160 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da

Displaying 1–10 of 160 metabolites

Health Effects

No health effects information available for this bacterium.