Vibrio sp. JCM 18905

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. JCM 18905 is characterized by having a single replicon, which indicates a streamlined genomic structure. This trait can be significant for its adaptability and efficiency in replication and gene expression. The organism is cataloged under the accession number BAYS00000000.1, which serves as a reference for genomic studies and comparisons within the Vibrio genus. Vibrio species are known for their diverse ecological roles, often found in marine environments. While specific ecological interactions for Vibrio sp. JCM 18905 are not detailed, members of the Vibrio genus are typically associated with aquatic ecosystems and can play roles as pathogens, symbionts, or essential components of marine microbiomes. The presence of a single replicon may suggest a potential for rapid adaptation to environmental changes, as the simplicity of its genomic architecture can facilitate quicker evolutionary responses. This trait could be advantageous in fluctuating marine environments, where competition and resource availability can change rapidly. In summary, Vibrio sp. JCM 18905, with its single replicon and designated genomic reference, exemplifies characteristics that may contribute to its ecological versatility in marine ecosystems. Understanding these traits can provide insights into how Vibrio species adapt and thrive in diverse aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. JCM 18905
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. JCM 18905
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. JCM 18905 DNA, contig: JCM18905.contig00064, whole

Gene Summary

Adenine Count

1407233 bp

Thymine Count

1435234 bp

Guanine Count

1189180 bp

Cytosine Count

1124897 bp

Genome Length

5156544 bp

Protein-coding Genes

4703 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duplicated atpase component mtsb of energizing module of methionine-regulated ecf transporterJCM18905_374Not AvailableNegative398184 - 3984358965.8
substrate-specific component mtsa of methionine-regulated ecf transporterJCM18905_375Not AvailableNegative398442 - 39899319628.7
membrane fusion component of tripartite multidrug resistance systemJCM18905_376Not AvailableNegative399332 - 40013441819.0
gtpaseJCM18905_377Not AvailableNegative400490 - 40084614122.2
ggdef domain proteinJCM18905_378Not AvailableNegative400954 - 40217745907.2
ggdef domain proteinJCM18905_379Not AvailableNegative402153 - 40270420204.4
hypothetical proteinJCM18905_380Not AvailableNegative402688 - 40351055830.1
hypothetical proteinJCM18905_381Not AvailableNegative404336 - 40515956383.8
purine nucleoside phosphorylaseJCM18905_382Not AvailableNegative405881 - 40653723748.8
hypothetical proteinJCM18905_383Not AvailablePositive406993 - 40794336275.7

Displaying genes 421 – 430 of 4816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.