Vibrio sp. JCM 18904

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio sp. JCM 18904 is a distinct microbial species characterized by possessing a single replicon. This trait indicates a simplified genomic structure compared to other bacteria that may have multiple replicons. The genome of Vibrio sp. JCM 18904 is accessible under the accession number BAYR00000000.1, which provides a reference point for researchers interested in its genetic makeup and potential applications. Vibrio species are known for their ecological roles, particularly in aquatic environments. They are often associated with marine and estuarine ecosystems, where they play a crucial role in nutrient cycling and the decomposition of organic matter. The presence of Vibrio sp. JCM 18904 in these habitats could suggest its involvement in similar ecological functions, contributing to the overall health and balance of marine ecosystems. Understanding the specific traits and genetic composition of Vibrio sp. JCM 18904 can offer insights into its adaptability and resilience in varying environmental conditions. The single replicon may confer advantages in terms of genetic stability and efficient replication, allowing the organism to thrive in competitive environments. This adaptability is essential for survival in fluctuating habitats typically encountered by Vibrio species, emphasizing the importance of studying bacteria like Vibrio sp. JCM 18904 to comprehend their ecological significance and potential impacts on marine biodiversity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio sp. JCM 18904
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio sp. JCM 18904
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio sp. JCM 18904 DNA, contig: JCM18904.contig00070, whole

Gene Summary

Adenine Count

1457645 bp

Thymine Count

1462779 bp

Guanine Count

1205155 bp

Cytosine Count

1144606 bp

Genome Length

5270185 bp

Protein-coding Genes

4874 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
arginine abc transporter, permease protein artqJCM18904_46Not AvailablePositive50512 - 5120124667.7
arginine abc transporter, permease protein artmJCM18904_47Not AvailablePositive51198 - 5186324547.8
protocatechuate 3,4-dioxygenase beta chainJCM18904_48Not AvailablePositive52002 - 5258321768.0
transcriptional regulatorJCM18904_49Not AvailableNegative52593 - 5342330451.5
glutathione s-transferaseJCM18904_50Not AvailablePositive53544 - 5419424647.1
nonf-related proteinJCM18904_51Not AvailableNegative54279 - 5495023892.0
transcriptional regulatorJCM18904_52Not AvailablePositive55068 - 5595632655.8
electron transfer flavoprotein-ubiquinone oxidoreductaseJCM18904_53Not AvailableNegative56016 - 5766159514.1
electron transfer flavoprotein, alpha subunitJCM18904_54Not AvailablePositive57829 - 5839234051.2
dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complexJCM18904_55Not AvailableNegative58863 - 6001441460.3

Displaying genes 131 – 140 of 5003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.