Pseudomonas veronii 1YdBTEX2

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas veronii 1YdBTEX2 is a strain of bacteria notable for its ability to degrade various environmental pollutants, particularly hydrocarbons. This strain possesses three replicons, which are segments of DNA that can replicate independently within the cell. The presence of multiple replicons may contribute to its adaptability and potential metabolic versatility in various environments. The strain is cataloged under several accession numbers, specifically LT599585.1, LT599584.1, and LT599583.1. These identifiers are crucial for researchers seeking to access genetic and genomic information related to Pseudomonas veronii 1YdBTEX2. The availability of these sequences can facilitate studies into its metabolic pathways, interactions with other microorganisms, and its role in bioremediation processes. Biologically, Pseudomonas veronii 1YdBTEX2 exemplifies the functional diversity found in the Pseudomonas genus, which is known for its environmental resilience and ability to thrive in various ecological niches. The strain’s capacity to degrade pollutants suggests it could play a significant role in bioremediation efforts, particularly in contaminated environments such as oil spills or industrial waste sites. The metabolic pathways encoded by its replicons may enhance its utility in environmental biotechnology, supporting the development of strategies for pollutant degradation and ecosystem restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas veronii
Strain1YdBTEX2

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas veronii 1YdBTEX2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas veronii 1YdBTEX2 genome assembly, chromosome: PVE_r2.

Gene Summary

Adenine Count

192351 bp

Thymine Count

194932 bp

Guanine Count

230266 bp

Cytosine Count

227199 bp

Genome Length

844748 bp

Protein-coding Genes

1015 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent rna helicase deadPVE_R1G1796Not AvailablePositive1911772 - 191344560664.5
hypothetical proteinPVE_R1G1797Not AvailablePositive1913821 - 191481635803.2
extradiol ring-cleavage dioxygenasePVE_R1G1798Not AvailableNegative1915006 - 191577327668.9
thiopurine s-methyltransferasePVE_R1G1799Not AvailablePositive1915876 - 191653224670.7
protease htpxPVE_R1G1800Not AvailableNegative1916604 - 191749132519.0
glutamate-pyruvate aminotransferase alaaPVE_R1G1801Not AvailableNegative1917796 - 191900744775.2
peptide methionine sulfoxide reductase msrbPVE_R1G1802Not AvailablePositive1919210 - 191960214567.4
glutathione peroxidase 2PVE_R1G1803Not AvailablePositive1919730 - 192021517691.6
marr family transcriptional regulatorPVE_R1G1805Not AvailablePositive1920212 - 192067617323.1
histidine kinasePVE_R1G1804Not AvailableNegative1920657 - 192296684865.7

Displaying genes 2851 – 2860 of 7548 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.