Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643

Non-motileAnaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Halanaerobiales

Family

Halanaerobiaceae

Genus

Halanaerobium

Description

Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 is an anaerobic, mesophilic bacterium classified as a chemoheterotroph. This subspecies relies on organic compounds for energy, thriving in environments devoid of oxygen. It does not exhibit mobility and is nonsporulating, indicating that it does not form spores as a means of survival under unfavorable conditions. The organism possesses a single replicon, suggesting a streamlined genomic structure that may contribute to its metabolic efficiency. The presence of flagella, while not indicative of mobility in this case, may play a role in its sensory mechanisms or in attachment to surfaces in its natural habitat. Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 is associated with various ecological niches where anaerobic conditions prevail, such as sediments and the gastrointestinal tracts of animals. Its ability to metabolize complex carbohydrates can influence the dynamics of organic matter decomposition in these environments. The bacterium's metabolic capabilities may also contribute to carbon cycling and nutrient availability, highlighting its potential ecological significance in anaerobic ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderHalanaerobiales
FamilyHalanaerobiaceae
GenusHalanaerobium
SpeciesHalanaerobium saccharolyticum
Strainsubsp. saccharolyticum DSM 6643

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 WGS

Gene Summary

Adenine Count

987193 bp

Thymine Count

959307 bp

Guanine Count

484788 bp

Cytosine Count

442577 bp

Genome Length

2873865 bp

Protein-coding Genes

2664 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna polymerase iHSACCH_00329Not AvailablePositive328950 - 331592101344.0
formamidopyrimidine-dna glycosylaseHSACCH_00330Not AvailablePositive331585 - 33241531683.4
methylglyoxal synthaseHSACCH_00331Not AvailablePositive332437 - 33341736667.6
soluble lytic murein transglycosylase and related regulatory proteins (some contain lysm/invasin domains)HSACCH_00332Not AvailablePositive333437 - 33404523844.7
dipeptide-binding abc transporter, periplasmic substrate-binding component (tc 3.a.1.5.2)HSACCH_00333Not AvailablePositive334295 - 33610668630.5
dipeptide transport system permease protein dppb (tc 3.a.1.5.2)HSACCH_00334Not AvailablePositive336271 - 33724535885.6
dipeptide transport system permease protein dppc (tc 3.a.1.5.2)HSACCH_00335Not AvailablePositive337253 - 33812832368.0
oligopeptide transport atp-binding protein oppd (tc 3.a.1.5.1)HSACCH_00336Not AvailablePositive338171 - 33920238424.5
oligopeptide transport atp-binding protein oppf (tc 3.a.1.5.1)HSACCH_00337Not AvailablePositive339202 - 34017636171.1
abc peptide transporter, periplasmic binding proteinHSACCH_00338Not AvailablePositive340306 - 34189563256.1

Displaying genes 351 – 360 of 2730 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.