Leucobacter sp. UCD-THU

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Leucobacter

Description

Leucobacter sp. UCD-THU is characterized by having a single replicon, which contributes to its genomic organization and stability. The organism is cataloged under the accession number APJM00000000.1, indicating that its genetic information is available for further research and analysis. Leucobacter species are typically known for their role in various ecological niches, often associated with soil and plant environments. They are part of a diverse group of bacteria that can contribute to soil health and nutrient cycling. The specific traits of Leucobacter sp. UCD-THU could suggest potential applications in bioremediation or agriculture, although detailed functional studies are required to assess its capabilities fully. The genomic data available may offer insights into the metabolic pathways and ecological interactions of Leucobacter sp. UCD-THU. Understanding these traits can provide a basis for exploring its potential roles in microbial communities and its interactions with plants and other microorganisms. This highlights the ecological significance of Leucobacter sp. UCD-THU within its habitat, emphasizing the importance of studying such microorganisms to understand their contributions to ecosystem dynamics.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusLeucobacter
SpeciesLeucobacter sp. UCD-THU
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leucobacter sp. UCD-THU contig_30, whole genome shotgun sequence.

Gene Summary

Adenine Count

492136 bp

Thymine Count

490892 bp

Guanine Count

1169795 bp

Cytosine Count

1163549 bp

Genome Length

3316448 bp

Protein-coding Genes

2851 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
agmatine deiminaseH490_0113590Not AvailablePositive2968017 - 296904237429.6
iron abc transporter atp-binding proteinH490_0113595Not AvailablePositive2969144 - 297104568435.4
aldehyde dehydrogenaseH490_0113600Not AvailablePositive2971194 - 297271752540.2
hypothetical proteinH490_0113605Not AvailablePositive2972946 - 297331712705.6
hypothetical proteinH490_0113610Not AvailableNegative2973569 - 297400314985.9
phosphoribosylaminoimidazolecarboxamide formyltransferaseH490_0113615Not AvailableNegative2974104 - 297576258283.5
phosphoribosylglycinamide formyltransferaseH490_0113620Not AvailableNegative2975868 - 297648521593.8
hypothetical proteinH490_0113625Not AvailableNegative2976706 - 297724519879.4
iron abc transporter permeaseH490_0113630Not AvailableNegative2977245 - 297885555890.0
abc transporter substrate-binding proteinH490_0113635Not AvailableNegative2979058 - 298017038568.4

Displaying genes 2611 – 2620 of 2930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.