Dietzia sp. UCD-THP

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Dietziaceae

Genus

Dietzia

Description

Dietzia sp. UCD-THP is a bacterium characterized by having a single replicon, which suggests a streamlined genomic organization. This trait may contribute to its adaptability and efficiency in various environments. The complete genomic sequence of this strain is cataloged under the accession number AOSR00000000.1, providing a critical reference for future studies and comparisons within the Dietzia genus. In the context of microbiological research, Dietzia species are known for their diverse metabolic capabilities, including the ability to degrade complex organic compounds. This trait positions them as potential candidates for bioremediation applications, particularly in environments contaminated with hydrocarbons or other pollutants. The presence of a single replicon in Dietzia sp. UCD-THP may also indicate a specialized evolutionary path, allowing it to thrive in specific niches. The ecological significance of Dietzia sp. UCD-THP is underscored by its potential role in ecosystem functioning, particularly in the breakdown of organic matter and nutrient cycling. Its metabolic versatility could facilitate the degradation of pollutants, thus contributing to environmental health. Overall, the unique genomic structure and metabolic traits of Dietzia sp. UCD-THP highlight its importance in both ecological contexts and biotechnological applications, meriting further investigation into its capabilities and interactions within microbial communities.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyDietziaceae
GenusDietzia
SpeciesDietzia sp. UCD-THP
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dietzia sp. UCD-THP contig_219, whole genome shotgun sequence.

Gene Summary

Adenine Count

597870 bp

Thymine Count

596810 bp

Guanine Count

1356515 bp

Cytosine Count

1364380 bp

Genome Length

3915613 bp

Protein-coding Genes

3483 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydrolaseH483_0116600Not AvailableNegative3482865 - 348363226199.0
hypothetical proteinH483_0116605Not AvailableNegative3483805 - 348474932455.8
aspartate kinaseH483_0116610Not AvailablePositive3484821 - 348608344575.9
hypothetical proteinH483_0116615Not AvailableNegative3486062 - 348706036354.2
aspartate-semialdehyde dehydrogenaseH483_0116620Not AvailablePositive3487449 - 348848336136.9
sulfataseH483_0116625Not AvailableNegative3488551 - 349028462263.1
sulfatase-modifying factor 1H483_0116630Not AvailableNegative3490392 - 349128532370.1
major facilitator transporterH483_0116640Not AvailableNegative3492427 - 349378847492.7
3-isopropylmalate dehydrataseH483_0116645Not AvailableNegative3493867 - 349440619074.6
3-isopropylmalate dehydrataseH483_0116650Not AvailableNegative3494403 - 349565945168.4

Displaying genes 3191 – 3200 of 3543 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.