Clavibacter seminis

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter seminis is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and the absence of mobility, as it lacks flagella. It typically exists in pairs or singles and has a single membrane structure. This organism thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating that it can grow within a moderate temperature range. C. seminis is a free-living bacterium, which means it does not rely on a host organism for survival. Its ecological role may involve interactions with various habitats, although specific details about its environmental niches are not provided. The bacterium is cataloged under the accession number AZQZ00000000.1, which is used for genetic and taxonomic reference. The biological characteristics of C. seminis, such as its Gram-positive nature and aerobic lifestyle, suggest that it may play a role in nutrient cycling within its habitats. Its ability to thrive in pairs or singles could influence its interactions with other microorganisms in the environment. Understanding the traits of C. seminis can provide insights into its potential applications in agriculture or biotechnology, particularly if its ecological functions are further explored.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter seminis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter cf. michiganensis LMG 26808 LMG26808_9, whole genome

Gene Summary

Adenine Count

479108 bp

Thymine Count

477914 bp

Guanine Count

1233147 bp

Cytosine Count

1230584 bp

Genome Length

3420753 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinW824_02515Not AvailableNegative511015 - 51172225354.3
oxidoreductaseW824_02520Not AvailableNegative511818 - 51292738542.4
xylose isomeraseW824_02525Not AvailableNegative512924 - 51373028855.7
glyoxalaseW824_02530Not AvailablePositive513967 - 51435614040.4
hypothetical proteinW824_02535Not AvailableNegative514373 - 51570143739.1
padr family transcriptional regulatorW824_02540Not AvailableNegative515698 - 51608413594.2
alpha/beta hydrolaseW824_02545Not AvailablePositive516203 - 51724037852.7
hypothetical proteinW824_02550Not AvailableNegative517237 - 5174888536.38
hypothetical proteinW824_02555Not AvailableNegative517846 - 5180707860.62
atp-dependent dna helicase recqW824_02560Not AvailableNegative518089 - 51990365603.0

Displaying genes 521 – 530 of 3199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.