Clavibacter seminis

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter seminis is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and the absence of mobility, as it lacks flagella. It typically exists in pairs or singles and has a single membrane structure. This organism thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating that it can grow within a moderate temperature range. C. seminis is a free-living bacterium, which means it does not rely on a host organism for survival. Its ecological role may involve interactions with various habitats, although specific details about its environmental niches are not provided. The bacterium is cataloged under the accession number AZQZ00000000.1, which is used for genetic and taxonomic reference. The biological characteristics of C. seminis, such as its Gram-positive nature and aerobic lifestyle, suggest that it may play a role in nutrient cycling within its habitats. Its ability to thrive in pairs or singles could influence its interactions with other microorganisms in the environment. Understanding the traits of C. seminis can provide insights into its potential applications in agriculture or biotechnology, particularly if its ecological functions are further explored.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter seminis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter cf. michiganensis LMG 26808 LMG26808_9, whole genome

Gene Summary

Adenine Count

479108 bp

Thymine Count

477914 bp

Guanine Count

1233147 bp

Cytosine Count

1230584 bp

Genome Length

3420753 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinW824_10575Not AvailablePositive2212102 - 221240111113.3
cell division proteinW824_10580Not AvailablePositive2212540 - 221318723546.2
rna pseudouridine synthaseW824_10585Not AvailablePositive2213323 - 221424032925.9
dna polymerase iii subunit alphaW824_10590Not AvailablePositive2214317 - 2217829129464.0
flavin oxidoreductaseW824_10595Not AvailableNegative2217861 - 221837617609.8
histidinol dehydrogenaseW824_10600Not AvailablePositive2218438 - 221974244566.1
nrdr family transcriptional regulatorW824_10605Not AvailablePositive2219760 - 222023317298.4
diguanylate cyclaseW824_10610Not AvailablePositive2220297 - 222133136392.9
hypothetical proteinW824_10615Not AvailableNegative2221362 - 222195521894.7
hypothetical proteinW824_10620Not AvailablePositive2221996 - 222341749265.7

Displaying genes 2071 – 2080 of 3199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.