Clavibacter seminis

Gram-positiveRodNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Clavibacter

Description

Clavibacter seminis is a Gram-positive, rod-shaped bacterium characterized by its aerobic metabolism and the absence of mobility, as it lacks flagella. It typically exists in pairs or singles and has a single membrane structure. This organism thrives optimally at a temperature of 25°C and is classified as mesophilic, indicating that it can grow within a moderate temperature range. C. seminis is a free-living bacterium, which means it does not rely on a host organism for survival. Its ecological role may involve interactions with various habitats, although specific details about its environmental niches are not provided. The bacterium is cataloged under the accession number AZQZ00000000.1, which is used for genetic and taxonomic reference. The biological characteristics of C. seminis, such as its Gram-positive nature and aerobic lifestyle, suggest that it may play a role in nutrient cycling within its habitats. Its ability to thrive in pairs or singles could influence its interactions with other microorganisms in the environment. Understanding the traits of C. seminis can provide insights into its potential applications in agriculture or biotechnology, particularly if its ecological functions are further explored.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusClavibacter
SpeciesClavibacter michiganensis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Clavibacter seminis
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clavibacter cf. michiganensis LMG 26808 LMG26808_9, whole genome

Gene Summary

Adenine Count

479108 bp

Thymine Count

477914 bp

Guanine Count

1233147 bp

Cytosine Count

1230584 bp

Genome Length

3420753 bp

Protein-coding Genes

3136 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseW824_10525Not AvailablePositive2200580 - 220198949441.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseW824_10530Not AvailablePositive2201983 - 220309239772.2
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseW824_10535Not AvailablePositive2203095 - 220463954673.5
cell division proteinW824_10540Not AvailablePositive2204773 - 220588539216.8
udp-diphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferaseW824_10545Not AvailablePositive2205882 - 220698537981.9
udp-n-acetylmuramate--alanine ligaseW824_10550Not AvailablePositive2207028 - 220845850272.9
peptidase s33W824_10555Not AvailablePositive2208789 - 220948724521.5
cell division protein ftszW824_10560Not AvailablePositive2209625 - 221076438526.8
alanine racemaseW824_10565Not AvailablePositive2210851 - 221149222590.8
cell division protein sepfW824_10570Not AvailablePositive2211541 - 221203517838.2

Displaying genes 2061 – 2070 of 3199 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.