Corynebacterium casei LMG S-19264

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium casei LMG S-19264 is characterized by having three distinct replicons. This trait is significant as it may contribute to the bacterium's genetic diversity and adaptability. The strain is documented in several accessions, specifically NZ_CP004352.1, NZ_CP004351.1, and NZ_CP004350.1. These accessions provide a reference for genomic studies and facilitate further research into the genetic makeup and potential applications of C. casei. Corynebacterium species, including C. casei, are known for their role in various ecological niches and their potential use in biotechnology, particularly in fermentation processes and probiotic applications. The presence of multiple replicons may suggest a complex genetic architecture that could influence metabolic functions and stress responses, further emphasizing the ecological versatility of this microorganism. The understanding of C. casei's genetic structure through these accessions can pave the way for exploring its practical applications in health and industry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium casei
StrainLMG S-19264

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium casei LMG S-19264
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcheese
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium casei LMG S-19264


Gene Summary

Adenine Count

3504 bp

Thymine Count

3802 bp

Guanine Count

4267 bp

Cytosine Count

4691 bp

Genome Length

16264 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCCASEI_RS14225Not AvailablePositive9432 - 1002221471.1
atp-binding cassette domain-containing proteinCCASEI_RS14230Not AvailablePositive10019 - 1147952048.6
energy-coupling factor transporter transmembrane component tCCASEI_RS14235Not AvailablePositive11476 - 1216225629.4
is1380 family transposaseCCASEI_RS14240Not AvailableNegative13012 - 1443951074.1
is6 family transposaseCCASEI_RS14245Not AvailableNegative14543 - 1514522888.6
chromosomal replication initiator protein dnaaCCASEI_RS00005Not AvailablePositive1 - 184869710.1
dna polymerase iii subunit betaCCASEI_RS00010Not AvailablePositive2621 - 381743235.6
dna replication/repair protein recfCCASEI_RS00015Not AvailablePositive3830 - 512247444.0
dcia family proteinCCASEI_RS00020Not AvailablePositive5115 - 571122557.1
dna topoisomerase (atp-hydrolyzing) subunit bCCASEI_RS00025Not AvailablePositive6011 - 808676439.4

Displaying genes 11 – 20 of 2884 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

26 records
Metabolite IDMetabolite nameStructureCAS number
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 26 metabolites

Health Effects

No health effects information available for this bacterium.