Corynebacterium casei LMG S-19264

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Corynebacteriaceae

Genus

Corynebacterium

Description

Corynebacterium casei LMG S-19264 is characterized by having three distinct replicons. This trait is significant as it may contribute to the bacterium's genetic diversity and adaptability. The strain is documented in several accessions, specifically NZ_CP004352.1, NZ_CP004351.1, and NZ_CP004350.1. These accessions provide a reference for genomic studies and facilitate further research into the genetic makeup and potential applications of C. casei. Corynebacterium species, including C. casei, are known for their role in various ecological niches and their potential use in biotechnology, particularly in fermentation processes and probiotic applications. The presence of multiple replicons may suggest a complex genetic architecture that could influence metabolic functions and stress responses, further emphasizing the ecological versatility of this microorganism. The understanding of C. casei's genetic structure through these accessions can pave the way for exploring its practical applications in health and industry.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyCorynebacteriaceae
GenusCorynebacterium
SpeciesCorynebacterium casei
StrainLMG S-19264

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Corynebacterium casei LMG S-19264
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcheese
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Corynebacterium casei LMG S-19264 plasmid pCASE2, complete

Gene Summary

Adenine Count

3504 bp

Thymine Count

3802 bp

Guanine Count

4267 bp

Cytosine Count

4691 bp

Genome Length

16264 bp

Protein-coding Genes

15 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plasmid pria4b orf-3 family proteinCCASEI_RS14435Not AvailableNegative1773259 - 177453047651.6
alpha/beta hydrolase family proteinCCASEI_RS08175Not AvailablePositive1774707 - 177592143149.2
cutinase family proteinCCASEI_RS08180Not AvailableNegative1776020 - 177688331039.6
hypothetical proteinCCASEI_RS08185Not AvailablePositive1777493 - 17777058383.87
uvrd-helicase domain-containing proteinCCASEI_RS08190Not AvailableNegative1777839 - 177927252849.3
atp-dependent endonucleaseCCASEI_RS08195Not AvailableNegative1779275 - 178099662873.6
m48 family metallopeptidaseCCASEI_RS08200Not AvailableNegative1781078 - 178180628218.8
type i restriction endonuclease subunit rCCASEI_RS08205Not AvailableNegative1781790 - 1784876117239.0
restriction endonuclease subunit sCCASEI_RS14440Not AvailableNegative1784873 - 178607844443.4
class i sam-dependent dna methyltransferaseCCASEI_RS08215Not AvailableNegative1786075 - 178852591518.0

Displaying genes 1661 – 1670 of 2884 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

26 records
Metabolite IDMetabolite nameStructureCAS number
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da
BASm0001774tetradecanoateC14H27O2Chemical structure of tetradecanoateNot available
Average227.363Da
Monoisotopic227.2011051Da
BASm0001775(9Z)-octadecenoateC18H33O2Chemical structure of (9Z)-octadecenoateNot available
Average281.4534Da
Monoisotopic281.2480553Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00019773,4-dihydroxybenzoateC7H5O4Chemical structure of 3,4-dihydroxybenzoateNot available
Average153.114Da
Monoisotopic153.019332221Da
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da

Displaying 1–10 of 26 metabolites

Health Effects

No health effects information available for this bacterium.