Cycloclasticus sp. symbiont of Bathymodiolus heckerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus sp. is a notable symbiont found in Bathymodiolus heckerae, a species of deep-sea bivalve. This organism is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient metabolic processes. The genetic information for Cycloclasticus sp. can be accessed through the accession number LWTL00000000.1. As a symbiont, Cycloclasticus sp. plays a crucial role in the ecology of Bathymodiolus heckerae. This bivalve typically inhabits chemosynthetic environments, such as hydrothermal vents and cold seeps, where it relies on its symbiotic relationships to obtain nutrients. Cycloclasticus sp. likely contributes to the nutritional needs of its host through the oxidation of hydrocarbons and other organic compounds, a process that is essential in these nutrient-limited habitats. The interaction between Cycloclasticus sp. and Bathymodiolus heckerae exemplifies the complex relationships within deep-sea ecosystems. Such symbiotic associations enable the survival of organisms in extreme environments where traditional food sources are scarce. Understanding the specific roles and contributions of Cycloclasticus sp. can provide insights into the broader ecological dynamics of chemosynthetic communities and the adaptations that allow life to thrive in such habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus sp. symbiont of Bathymodiolus heckerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Cycloclasticus sp. symbiont of Bathymodiolus heckerae isolate

Gene Summary

Adenine Count

617632 bp

Thymine Count

613636 bp

Guanine Count

456066 bp

Cytosine Count

443092 bp

Genome Length

2130426 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
enoyl-acp reductaseA6F70_00385Not AvailablePositive2018011 - 201879028015.9
Trna-metNot AvailableNot AvailablePositive2019235 - 2019311Not Available
redox-regulated atpase ychfA6F70_00395Not AvailableNegative2019386 - 202047739668.5
3-isopropylmalate dehydrogenaseA6F70_00400Not AvailablePositive2020633 - 202173940523.3
2-isopropylmalate synthaseA6F70_00405Not AvailableNegative2021810 - 202331254658.7
3-isopropylmalate dehydratase small subunitA6F70_00410Not AvailableNegative2023356 - 202397023300.4
isopropylmalate isomeraseA6F70_00415Not AvailableNegative2023975 - 202537550041.6
Trna-thrNot AvailableNot AvailablePositive2025562 - 2025637Not Available
hypothetical proteinA6F70_00425Not AvailableNegative2025682 - 202634124957.2
type iii pantothenate kinaseA6F70_00430Not AvailableNegative2026338 - 202707526645.9

Displaying genes 1951 – 1960 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.