Cycloclasticus sp. symbiont of Bathymodiolus heckerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus sp. is a notable symbiont found in Bathymodiolus heckerae, a species of deep-sea bivalve. This organism is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient metabolic processes. The genetic information for Cycloclasticus sp. can be accessed through the accession number LWTL00000000.1. As a symbiont, Cycloclasticus sp. plays a crucial role in the ecology of Bathymodiolus heckerae. This bivalve typically inhabits chemosynthetic environments, such as hydrothermal vents and cold seeps, where it relies on its symbiotic relationships to obtain nutrients. Cycloclasticus sp. likely contributes to the nutritional needs of its host through the oxidation of hydrocarbons and other organic compounds, a process that is essential in these nutrient-limited habitats. The interaction between Cycloclasticus sp. and Bathymodiolus heckerae exemplifies the complex relationships within deep-sea ecosystems. Such symbiotic associations enable the survival of organisms in extreme environments where traditional food sources are scarce. Understanding the specific roles and contributions of Cycloclasticus sp. can provide insights into the broader ecological dynamics of chemosynthetic communities and the adaptations that allow life to thrive in such habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus sp. symbiont of Bathymodiolus heckerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Cycloclasticus sp. symbiont of Bathymodiolus heckerae isolate

Gene Summary

Adenine Count

617632 bp

Thymine Count

613636 bp

Guanine Count

456066 bp

Cytosine Count

443092 bp

Genome Length

2130426 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide transport periplasmic protein lptaA6F70_01525Not AvailableNegative1873886 - 187438618383.3
lps export abc transporter periplasmic protein lptcA6F70_01530Not AvailableNegative1874373 - 187493321161.4
3-deoxy-d-manno-octulosonate 8-phosphate phosphataseA6F70_01535Not AvailableNegative1874941 - 187548019461.3
d-arabinose 5-phosphate isomeraseA6F70_01540Not AvailableNegative1875477 - 187646034633.4
calcium/sodium antiporterA6F70_01545Not AvailableNegative1876480 - 187745734193.5
abc transporter atp-binding proteinA6F70_01550Not AvailablePositive1877782 - 187851026460.6
abc transporter permeaseA6F70_01555Not AvailablePositive1878530 - 187931227734.8
outer membrane lipid asymmetry maintenance protein mladA6F70_01560Not AvailablePositive1879314 - 187978116665.6
anti-sigma-factorA6F70_01565Not AvailablePositive1879781 - 188011912544.4
udp-n-acetylglucosamine 1-carboxyvinyltransferaseA6F70_01570Not AvailablePositive1880119 - 188138444553.4

Displaying genes 1811 – 1820 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.