Cycloclasticus sp. symbiont of Bathymodiolus heckerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus sp. is a notable symbiont found in Bathymodiolus heckerae, a species of deep-sea bivalve. This organism is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient metabolic processes. The genetic information for Cycloclasticus sp. can be accessed through the accession number LWTL00000000.1. As a symbiont, Cycloclasticus sp. plays a crucial role in the ecology of Bathymodiolus heckerae. This bivalve typically inhabits chemosynthetic environments, such as hydrothermal vents and cold seeps, where it relies on its symbiotic relationships to obtain nutrients. Cycloclasticus sp. likely contributes to the nutritional needs of its host through the oxidation of hydrocarbons and other organic compounds, a process that is essential in these nutrient-limited habitats. The interaction between Cycloclasticus sp. and Bathymodiolus heckerae exemplifies the complex relationships within deep-sea ecosystems. Such symbiotic associations enable the survival of organisms in extreme environments where traditional food sources are scarce. Understanding the specific roles and contributions of Cycloclasticus sp. can provide insights into the broader ecological dynamics of chemosynthetic communities and the adaptations that allow life to thrive in such habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus sp. symbiont of Bathymodiolus heckerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Cycloclasticus sp. symbiont of Bathymodiolus heckerae isolate

Gene Summary

Adenine Count

617632 bp

Thymine Count

613636 bp

Guanine Count

456066 bp

Cytosine Count

443092 bp

Genome Length

2130426 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gamma carbonic anhydrase family proteinA6F70_03395Not AvailablePositive1428993 - 142952919013.0
shikimate dehydrogenaseA6F70_03400Not AvailableNegative1429526 - 143033829016.7
delta-aminolevulinic acid dehydrataseA6F70_03405Not AvailableNegative1430341 - 143130634867.4
hypothetical proteinA6F70_03410Not AvailablePositive1431488 - 143195217265.8
organic solvent abc transporterA6F70_03415Not AvailablePositive1432013 - 143269625697.1
coproporphyrinogen iii oxidaseA6F70_03420Not AvailableNegative1432700 - 143361434803.6
trna threonylcarbamoyladenosine biosynthesis protein rimnA6F70_03425Not AvailableNegative1433632 - 143418620079.6
5-(carboxyamino)imidazole ribonucleotide mutaseA6F70_03430Not AvailableNegative1434202 - 143471717641.4
dna topoisomerase iA6F70_03435Not AvailableNegative1434732 - 143702686517.4
protein smgA6F70_03440Not AvailableNegative1437035 - 143751118042.6

Displaying genes 1371 – 1380 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.