Cycloclasticus sp. symbiont of Bathymodiolus heckerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus sp. is a notable symbiont found in Bathymodiolus heckerae, a species of deep-sea bivalve. This organism is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient metabolic processes. The genetic information for Cycloclasticus sp. can be accessed through the accession number LWTL00000000.1. As a symbiont, Cycloclasticus sp. plays a crucial role in the ecology of Bathymodiolus heckerae. This bivalve typically inhabits chemosynthetic environments, such as hydrothermal vents and cold seeps, where it relies on its symbiotic relationships to obtain nutrients. Cycloclasticus sp. likely contributes to the nutritional needs of its host through the oxidation of hydrocarbons and other organic compounds, a process that is essential in these nutrient-limited habitats. The interaction between Cycloclasticus sp. and Bathymodiolus heckerae exemplifies the complex relationships within deep-sea ecosystems. Such symbiotic associations enable the survival of organisms in extreme environments where traditional food sources are scarce. Understanding the specific roles and contributions of Cycloclasticus sp. can provide insights into the broader ecological dynamics of chemosynthetic communities and the adaptations that allow life to thrive in such habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus sp. symbiont of Bathymodiolus heckerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Cycloclasticus sp. symbiont of Bathymodiolus heckerae isolate

Gene Summary

Adenine Count

617632 bp

Thymine Count

613636 bp

Guanine Count

456066 bp

Cytosine Count

443092 bp

Genome Length

2130426 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription elongation factor grebA6F70_04080Not AvailablePositive1329212 - 132970618966.6
zinc-binding proteinA6F70_04085Not AvailablePositive1329801 - 133020515729.7
diguanylate cyclaseA6F70_04090Not AvailablePositive1330260 - 133123436868.5
stress responsive proteinA6F70_04095Not AvailablePositive1331260 - 133156211087.2
hypothetical proteinA6F70_04100Not AvailablePositive1331571 - 13317777730.39
phosphoribosylformylglycinamidine synthaseA6F70_04105Not AvailableNegative1331781 - 1335638140075.0
mbl fold metallo-hydrolaseA6F70_04110Not AvailableNegative1335631 - 133634726775.0
hypothetical proteinA6F70_04115Not AvailableNegative1336416 - 133702722296.6
4-hydroxy-tetrahydrodipicolinate synthaseA6F70_04120Not AvailableNegative1337061 - 133793030442.7
transport-associated proteinA6F70_04130Not AvailableNegative1338558 - 133925626094.5

Displaying genes 1281 – 1290 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.