Cycloclasticus sp. symbiont of Bathymodiolus heckerae

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus sp. is a notable symbiont found in Bathymodiolus heckerae, a species of deep-sea bivalve. This organism is characterized by having a single replicon, which indicates a streamlined genomic structure that may facilitate efficient metabolic processes. The genetic information for Cycloclasticus sp. can be accessed through the accession number LWTL00000000.1. As a symbiont, Cycloclasticus sp. plays a crucial role in the ecology of Bathymodiolus heckerae. This bivalve typically inhabits chemosynthetic environments, such as hydrothermal vents and cold seeps, where it relies on its symbiotic relationships to obtain nutrients. Cycloclasticus sp. likely contributes to the nutritional needs of its host through the oxidation of hydrocarbons and other organic compounds, a process that is essential in these nutrient-limited habitats. The interaction between Cycloclasticus sp. and Bathymodiolus heckerae exemplifies the complex relationships within deep-sea ecosystems. Such symbiotic associations enable the survival of organisms in extreme environments where traditional food sources are scarce. Understanding the specific roles and contributions of Cycloclasticus sp. can provide insights into the broader ecological dynamics of chemosynthetic communities and the adaptations that allow life to thrive in such habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus sp. symbiont of Bathymodiolus heckerae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Cycloclasticus sp. symbiont of Bathymodiolus heckerae isolate

Gene Summary

Adenine Count

617632 bp

Thymine Count

613636 bp

Guanine Count

456066 bp

Cytosine Count

443092 bp

Genome Length

2130426 bp

Protein-coding Genes

2011 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vi polysaccharide biosynthesis protein vipa/tvibA6F70_05455Not AvailablePositive1051760 - 105302546561.9
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseA6F70_05460Not AvailablePositive1053152 - 105457952191.7
Tmrna,resume consensus sequence (at 84): tatagttgcaaacgacgaNot AvailableNot AvailablePositive1054974 - 1055347Not Available
hypothetical proteinA6F70_05470Not AvailablePositive1055428 - 105612025919.3
ssra-binding proteinA6F70_05475Not AvailableNegative1056133 - 105660618031.1
transporterA6F70_05480Not AvailablePositive1056719 - 105807148616.8
ubiquinone-binding proteinA6F70_05485Not AvailablePositive1058077 - 105850816488.8
rnfh family proteinA6F70_05490Not AvailablePositive1058501 - 105880911314.7
2-isopropylmalate synthaseA6F70_05495Not AvailablePositive1059053 - 106060955860.5
thioesteraseA6F70_05500Not AvailableNegative1060689 - 106113816493.2

Displaying genes 1001 – 1010 of 2054 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.