Pseudomonas sp. FH4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. FH4 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number AOHN00000000.1, which provides a reference point for further genomic studies and comparisons within the Pseudomonas genus. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, which may contribute to their ecological roles. They are often found in soil and water ecosystems, where they play a significant part in nutrient cycling and the degradation of organic compounds. This metabolic flexibility allows them to utilize various substrates, making them important players in bioremediation processes. The characterization of Pseudomonas sp. FH4, with its single replicon, may suggest a potentially efficient genomic organization that could enhance its adaptability and survival in fluctuating environmental conditions. Understanding the genetic and phenotypic traits of this strain can provide insights into its ecological functions, particularly in relation to its interactions with other microorganisms and its role in biochemical cycles in its native habitat. Overall, the study of Pseudomonas sp. FH4 contributes to the broader understanding of Pseudomonas species, emphasizing their ecological significance and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. FH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. FH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. FH4 scf_29086_268.1_contig_1, whole genome shotgun

Gene Summary

Adenine Count

1217169 bp

Thymine Count

1189946 bp

Guanine Count

1787454 bp

Cytosine Count

1834948 bp

Genome Length

6029517 bp

Protein-coding Genes

5388 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorH097_01277Not AvailablePositive280456 - 28200955780.3
hypothetical proteinH097_01282Not AvailableNegative282013 - 286626172048.0
putrescine/polyamine-binding periplasmic proteinH097_01287Not AvailableNegative286743 - 28783440132.1
acetylpolyamine aminohydrolaseH097_01292Not AvailableNegative287831 - 28886537676.2
putative regulatory proteinH097_01297Not AvailableNegative289031 - 29002336747.9
putative l-asparaginaseH097_01302Not AvailableNegative290074 - 29105133745.7
amino acid carrier proteinH097_01307Not AvailableNegative291128 - 29257351914.0
aspartate ammonia-lyaseH097_01312Not AvailableNegative293056 - 29448050994.0
lysr family transcriptional regulatorH097_01317Not AvailablePositive294661 - 29558433455.6
n5-carboxyaminoimidazole ribonucleotide mutaseH097_01322Not AvailablePositive295901 - 29639216801.6

Displaying genes 371 – 380 of 5537 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.