Pseudomonas sp. FH4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. FH4 is characterized by having a single replicon, indicating a streamlined genomic structure. The strain is cataloged under the accession number AOHN00000000.1, which provides a reference point for further genomic studies and comparisons within the Pseudomonas genus. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, which may contribute to their ecological roles. They are often found in soil and water ecosystems, where they play a significant part in nutrient cycling and the degradation of organic compounds. This metabolic flexibility allows them to utilize various substrates, making them important players in bioremediation processes. The characterization of Pseudomonas sp. FH4, with its single replicon, may suggest a potentially efficient genomic organization that could enhance its adaptability and survival in fluctuating environmental conditions. Understanding the genetic and phenotypic traits of this strain can provide insights into its ecological functions, particularly in relation to its interactions with other microorganisms and its role in biochemical cycles in its native habitat. Overall, the study of Pseudomonas sp. FH4 contributes to the broader understanding of Pseudomonas species, emphasizing their ecological significance and potential applications in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. FH4
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. FH4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. FH4 scf_29086_268.1_contig_1, whole genome shotgun

Gene Summary

Adenine Count

1217169 bp

Thymine Count

1189946 bp

Guanine Count

1787454 bp

Cytosine Count

1834948 bp

Genome Length

6029517 bp

Protein-coding Genes

5388 genes

Non-Coding Genes

149 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system protein yscrH097_04829Not AvailableNegative1030137 - 103079023915.5
putative type iii secretion proteinH097_04834Not AvailableNegative1030787 - 103180936930.8
type iii secretion protein rsppH097_04839Not AvailableNegative1031806 - 103226416404.6
hypothetical proteinH097_04844Not AvailableNegative1032261 - 103268616415.5
type iii secretion atp synthase rscnH097_04849Not AvailableNegative1032673 - 103403148998.1
yscd/hrpq family type iii secretion apparatus proteinH097_04854Not AvailableNegative1034028 - 103493332991.0
type iii secretion protein rscvH097_04859Not AvailableNegative1035003 - 103709976338.7
type iii secretion regulator rspjH097_04864Not AvailableNegative1037096 - 103818739418.2
sigma factorH097_04869Not AvailablePositive1038449 - 103900021318.2
fosmidomycin resistance proteinH097_04874Not AvailableNegative1039038 - 104018640889.1

Displaying genes 1081 – 1090 of 5537 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.