Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Candidatus Brocadiia
Order
Candidatus Brocadiales
Family
Candidatus Scalinduaceae
Genus
Candidatus Scalindua
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Candidatus Brocadiia |
| Order | Candidatus Brocadiales |
| Family | Candidatus Scalinduaceae |
| Genus | Candidatus Scalindua |
| Species | Candidatus Scalindua japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1473246 bp
Thymine Count
1470198 bp
Guanine Count
943112 bp
Cytosine Count
926297 bp
Genome Length
4812853 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | SCALIN_C43_0032 | Not Available | Positive | 4422562 - 4423104 | 20662.0 |
| trna pseudouridine synthase | SCALIN_C43_0033 | Not Available | Positive | 4423101 - 4423292 | 6884.71 |
| methionyl-trna synthetase | SCALIN_C43_0034 | Not Available | Positive | 4423399 - 4423722 | 11547.0 |
| 16s rrna uridine-516 pseudouridylate synthase and related pseudouridylate synthases | SCALIN_C43_0035 | Not Available | Positive | 4423771 - 4424493 | 27390.9 |
| thiamine biosynthesis protein thic | SCALIN_C43_0036 | Not Available | Positive | 4424641 - 4425879 | 45132.6 |
| gmp synthase | SCALIN_C43_0037 | Not Available | Positive | 4425860 - 4426561 | 25990.8 |
| diguanylate cyclase | SCALIN_C43_0038 | Not Available | Positive | 4426852 - 4428051 | 44799.8 |
| large exoproteins | SCALIN_C43_0039 | Not Available | Positive | 4428249 - 4428485 | 9017.74 |
| 2-methylthioadenine synthetase | SCALIN_C43_0040 | Not Available | Positive | 4428903 - 4430300 | 52294.8 |
| phosphoglycerate mutase, ap superfamily | SCALIN_C43_0041 | Not Available | Negative | 4430265 - 4431461 | 43794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
