Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Candidatus Brocadiia
Order
Candidatus Brocadiales
Family
Candidatus Scalinduaceae
Genus
Candidatus Scalindua
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Candidatus Brocadiia |
| Order | Candidatus Brocadiales |
| Family | Candidatus Scalinduaceae |
| Genus | Candidatus Scalindua |
| Species | Candidatus Scalindua japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1473246 bp
Thymine Count
1470198 bp
Guanine Count
943112 bp
Cytosine Count
926297 bp
Genome Length
4812853 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucoamylase and related glycosyl hydrolases | SCALIN_C34_0062 | Not Available | Positive | 4092809 - 4094824 | 76733.5 |
| upf0301 protein bvaf_253 | SCALIN_C34_0063 | Not Available | Positive | 4095079 - 4095426 | 13258.1 |
| membrane protease subunit | SCALIN_C34_0064 | Not Available | Positive | 4095535 - 4096530 | 37686.8 |
| membrane protease subunit | SCALIN_C34_0065 | Not Available | Positive | 4096527 - 4096889 | 13728.7 |
| membrane protease subunit | SCALIN_C34_0066 | Not Available | Positive | 4096984 - 4097481 | 19273.7 |
| response regulator | SCALIN_C34_0067 | Not Available | Positive | 4098072 - 4098383 | 11445.8 |
| zinc/iron permease | SCALIN_C34_0068 | Not Available | Positive | 4099340 - 4099603 | 9529.95 |
| glycosyltransferase | SCALIN_C34_0069 | Not Available | Positive | 4099609 - 4100331 | 27621.3 |
| 3-deoxy-d-arabino-heptulosonate 7-phosphate (dahp) synthase | SCALIN_C34_0070 | Not Available | Negative | 4101190 - 4101543 | 13190.0 |
| mannosyltransferase och1 and related enzymes | SCALIN_C34_0071 | Not Available | Positive | 4101621 - 4102679 | 41664.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
