Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Candidatus Brocadiia
Order
Candidatus Brocadiales
Family
Candidatus Scalinduaceae
Genus
Candidatus Scalindua
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Candidatus Brocadiia |
| Order | Candidatus Brocadiales |
| Family | Candidatus Scalinduaceae |
| Genus | Candidatus Scalindua |
| Species | Candidatus Scalindua japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1473246 bp
Thymine Count
1470198 bp
Guanine Count
943112 bp
Cytosine Count
926297 bp
Genome Length
4812853 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tfp pilus assembly protein | SCALIN_C03_0024 | Not Available | Negative | 386209 - 386910 | 26007.7 |
| acetyltransferase | SCALIN_C03_0025 | Not Available | Positive | 387124 - 387573 | 17411.3 |
| porphobilinogen deaminase | SCALIN_C03_0026 | Not Available | Negative | 387726 - 388673 | 34598.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SCALIN_C03_0027 | Not Available | Positive | 388902 - 390167 | 45941.7 |
| ribosome recycling factor | SCALIN_C03_0028 | Not Available | Positive | 390219 - 391826 | 60061.1 |
| cold-shock protein | SCALIN_C03_0029 | Not Available | Positive | 392823 - 393023 | 7347.58 |
| cyclophilin type peptidyl-prolyl cis-trans isomerase | SCALIN_C03_0030 | Not Available | Negative | 393236 - 393829 | 22211.1 |
| n-methylhydantoinase b/acetone carboxylase, alpha subunit | SCALIN_C03_0031 | Not Available | Positive | 394134 - 395714 | 57196.7 |
| dna repair photolyase | SCALIN_C03_0032 | Not Available | Positive | 395797 - 396846 | 40302.7 |
| uroporphyrinogen-iii decarboxylase | SCALIN_C03_0033 | Not Available | Positive | 396887 - 397465 | 21708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
