Kingdom
Pseudomonadati
Phylum
Planctomycetota
Class
Candidatus Brocadiia
Order
Candidatus Brocadiales
Family
Candidatus Scalinduaceae
Genus
Candidatus Scalindua
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Planctomycetota |
| Class | Candidatus Brocadiia |
| Order | Candidatus Brocadiales |
| Family | Candidatus Scalinduaceae |
| Genus | Candidatus Scalindua |
| Species | Candidatus Scalindua japonica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1473246 bp
Thymine Count
1470198 bp
Guanine Count
943112 bp
Cytosine Count
926297 bp
Genome Length
4812853 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | SCALIN_C13_0215 | Not Available | Positive | 2026692 - 2026913 | 8383.37 |
| universal stress protein uspa and related nucleotide-binding proteins | SCALIN_C13_0216 | Not Available | Positive | 2027046 - 2027513 | 17395.5 |
| enoyl-coa hydratase/carnithine racemase | SCALIN_C13_0217 | Not Available | Negative | 2028191 - 2028685 | 18189.1 |
| dihydroxyacid dehydratase/phosphogluconate dehydratase | SCALIN_C13_0218 | Not Available | Positive | 2029039 - 2029617 | 23054.9 |
| signal transduction protein | SCALIN_C13_0219 | Not Available | Positive | 2029921 - 2030355 | 16174.1 |
| response regulator | SCALIN_C13_0220 | Not Available | Positive | 2030931 - 2031281 | 13419.4 |
| uncharacterized protein | SCALIN_C13_0221 | Not Available | Positive | 2031414 - 2031884 | 17529.4 |
| ammonium transport protein amtb | SCALIN_C13_0222 | Not Available | Positive | 2032009 - 2033466 | 51212.8 |
| thiamine biosynthesis protein thic | SCALIN_C13_0223 | Not Available | Positive | 2033426 - 2033758 | 12176.0 |
| phosphomethylpyrimidine synthase 2 | SCALIN_C13_0224 | Not Available | Positive | 2033795 - 2034013 | 8412.92 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
