Pseudomonas sp. URMO17WK12:I11

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. URMO17WK12:I11 is a bacterium characterized by possessing two replicons, which are essential for its genetic stability and replication. The specific accessions associated with this strain are NZ_LN865164.1 and NZ_LN854573.1. These accessions provide information about the genomic sequences that can be crucial for understanding the genetic makeup and potential functions of this organism. The presence of two replicons in Pseudomonas sp. URMO17WK12:I11 suggests a complex genomic architecture, which may contribute to its adaptability in diverse environments. The genus Pseudomonas is known for its metabolic versatility and ability to thrive in various ecological niches, including soil, water, and plant-associated environments. This adaptability is often linked to the presence of multiple replicons, allowing for the maintenance of diverse genetic traits that can confer advantages such as resistance to antibiotics or the ability to degrade environmental pollutants. Overall, the traits of Pseudomonas sp. URMO17WK12:I11, specifically its dual-replicon structure, underscore its potential role in ecological processes and bioremediation efforts. Understanding the genomic features of this strain through its accessions may provide insights into its functional capabilities and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. URMO17WK12:I11
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. URMO17WK12:I11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. URMO17WK12:I11 isolate Yellow chromosome 1,

Gene Summary

Adenine Count

923602 bp

Thymine Count

929207 bp

Guanine Count

1492053 bp

Cytosine Count

1490483 bp

Genome Length

4835345 bp

Protein-coding Genes

4233 genes

Non-Coding Genes

158 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Virion proteinPSHI_RS18785Not AvailablePositive4162884 - 416333016235.4
Hypothetical proteinPSHI_RS18790Not AvailablePositive4163327 - 416383017530.2
hnh endonuclease signature motif containing proteinPSHI_RS22395Not AvailableNegative4163848 - 416471131796.4
hypothetical proteinPSHI_RS18795Not AvailablePositive4165158 - 41653828387.91
PeptidasePSHI_RS18800Not AvailablePositive4165450 - 416583014218.2
IntegrasePSHI_RS22855Not AvailableNegative4166101 - 41663308507.27
Gp59PSHI_RS18805Not AvailableNegative4166549 - 416792249262.8
AttrNot AvailableNot AvailablePositive4176676 - 4176688Not Available
na+/h+ antiporter nhaaPSHI_RS00010Not AvailableNegative8 - 68124896.3
hydroxyacid dehydrogenasePSHI_RS00015Not AvailablePositive894 - 187135123.4

Displaying genes 81 – 90 of 10118 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.