Escherichia coli UMEA 3718-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli UMEA 3718-1 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella that facilitate movement, which can be advantageous in various habitats. Typically found in host-associated environments, E. coli UMEA 3718-1 is categorized as a free-living organism, indicating its ability to exist independently while still being associated with hosts. It has a single replicon and features a double membrane structure, which is a common characteristic of Gram-negative bacteria. The optimal growth temperature for E. coli UMEA 3718-1 is 37°C, placing it within the mesophilic temperature range. This temperature preference aligns with the typical body temperature of warm-blooded hosts, further supporting its ecological niche. The ability of E. coli UMEA 3718-1 to exist in pairs or as singles reflects its versatile growth patterns, allowing it to adapt to varying environmental conditions. The combination of these traits suggests that this bacterium plays a significant role in microbial communities, particularly in gut environments, where it may contribute to nutrient cycling and host interactions. Overall, the ecological insight gained from the traits of E. coli UMEA 3718-1 emphasizes the adaptability and ecological significance of this bacterium in host-associated environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainUMEA 3718-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli UMEA 3718-1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli UMEA 3718-1 acYyo-supercont1.15.C79, whole genome

Gene Summary

Adenine Count

1321414 bp

Thymine Count

1322436 bp

Guanine Count

1354711 bp

Cytosine Count

1363457 bp

Genome Length

5362018 bp

Protein-coding Genes

4731 genes

Non-Coding Genes

447 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinG994_00292Not AvailablePositive311683 - 31254632817.4
Hnh endonucleaseG994_00293Not AvailablePositive312566 - 31297315473.5
Small terminase subunitG994_00294Not AvailablePositive313099 - 31359317909.9
Large terminase subunitG994_00295Not AvailablePositive313590 - 31532365339.6
Putative integral membrane proteinG994_00296Not AvailablePositive315335 - 3155176381.13
Portal proteinG994_00297Not AvailablePositive315517 - 31675846115.0
Prohead proteaseG994_00298Not AvailablePositive316736 - 31738623991.6
Phage major capsid proteinG994_00299Not AvailablePositive317401 - 31860644296.7
Hypothetical proteinG994_00300Not AvailablePositive318656 - 3188838210.78
Head-tail connector proteinG994_00301Not AvailablePositive318858 - 31918112534.9

Displaying genes 11 – 20 of 5178 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.