Hyphomonas pacifica

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Hyphomonas

Description

Hyphomonas pacifica is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enable motility. This organism has a single replicon, indicating a streamlined genetic structure that is often associated with certain prokaryotic life forms. The genomic data for Hyphomonas pacifica is cataloged under the accession number AWFA00000000.1, which provides a reference for researchers seeking to study its genetic characteristics further. As a member of the Hyphomonadaceae family, Hyphomonas pacifica is typically found in marine environments, where it plays a role in the microbial community dynamics. Its motility and rod shape may offer advantages in nutrient acquisition and adaptation to fluctuating environmental conditions. Understanding such traits is essential for elucidating the ecological roles of this bacterium in its natural habitat. In summary, the traits of Hyphomonas pacifica, including its Gram-negative status, rod shape, flagella presence, and genomic structure, contribute to its ecological interactions and potential functions within marine ecosystems. Further research could explore its role in nutrient cycling and interactions with other microorganisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusHyphomonas
SpeciesHyphomonas pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomonas pacifica
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomonas pacifica strain T16B2 contig93, whole genome shotgun

Gene Summary

Adenine Count

711367 bp

Thymine Count

708009 bp

Guanine Count

1000042 bp

Cytosine Count

999279 bp

Genome Length

3418697 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHY2_00140Not AvailablePositive23501 - 236896760.0
thioesteraseHY2_00145Not AvailableNegative23767 - 2424317833.2
hypothetical proteinHY2_00150Not AvailableNegative24375 - 2479415542.7
abc transporter atp-binding proteinHY2_00155Not AvailableNegative24817 - 2617850224.0
enoyl-coa hydrataseHY2_00160Not AvailablePositive26436 - 2721828491.5
30s ribosomal protein s20HY2_00165Not AvailablePositive27359 - 276229726.0
hypothetical proteinHY2_00170Not AvailablePositive28168 - 2963454396.2
dna polymerase iii subunit betaHY2_00175Not AvailablePositive29830 - 3095140077.3
dna repair protein recfHY2_00180Not AvailablePositive30979 - 3209139649.1
hypothetical proteinHY2_00185Not AvailableNegative32088 - 3356053428.7

Displaying genes 41 – 50 of 3348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.