Hyphomonas pacifica

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomonadales

Family

Hyphomonadaceae

Genus

Hyphomonas

Description

Hyphomonas pacifica is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which enable motility. This organism has a single replicon, indicating a streamlined genetic structure that is often associated with certain prokaryotic life forms. The genomic data for Hyphomonas pacifica is cataloged under the accession number AWFA00000000.1, which provides a reference for researchers seeking to study its genetic characteristics further. As a member of the Hyphomonadaceae family, Hyphomonas pacifica is typically found in marine environments, where it plays a role in the microbial community dynamics. Its motility and rod shape may offer advantages in nutrient acquisition and adaptation to fluctuating environmental conditions. Understanding such traits is essential for elucidating the ecological roles of this bacterium in its natural habitat. In summary, the traits of Hyphomonas pacifica, including its Gram-negative status, rod shape, flagella presence, and genomic structure, contribute to its ecological interactions and potential functions within marine ecosystems. Further research could explore its role in nutrient cycling and interactions with other microorganisms in its environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomonadales
FamilyHyphomonadaceae
GenusHyphomonas
SpeciesHyphomonas pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Hyphomonas pacifica
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hyphomonas pacifica strain T16B2 contig93, whole genome shotgun

Gene Summary

Adenine Count

711367 bp

Thymine Count

708009 bp

Guanine Count

1000042 bp

Cytosine Count

999279 bp

Genome Length

3418697 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinHY2_00040Not AvailableNegative4727 - 538023988.9
hypothetical proteinHY2_00045Not AvailableNegative5436 - 636834054.5
hypothetical proteinHY2_00050Not AvailablePositive6542 - 688913278.4
hypothetical proteinHY2_00055Not AvailablePositive6886 - 70987824.34
radical sam proteinHY2_00060Not AvailableNegative7095 - 803033567.1
hypothetical proteinHY2_00065Not AvailableNegative8096 - 874623793.2
hypothetical proteinHY2_00070Not AvailablePositive9005 - 1028543973.1
ornithine carbamoyltransferaseHY2_00075Not AvailableNegative10289 - 1122734198.4
hypothetical proteinHY2_00080Not AvailablePositive11440 - 116317413.03
saccharopine dehydrogenaseHY2_00085Not AvailablePositive11794 - 1300844980.8

Displaying genes 21 – 30 of 3348 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.