Vibrio bivalvicida str. 605

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio bivalvicida str. 605 is characterized by having a single replicon, indicating a streamlined genomic structure. The genome of this strain is accessible under the accession number LLEI00000000.2, which provides a reference point for researchers exploring its genetic composition and potential applications. Vibrio bivalvicida is a species within the Vibrio genus, which is known for its ecological versatility and association with marine environments. Species in this genus often play significant roles in aquatic ecosystems, including interactions with shellfish, which may be particularly relevant for V. bivalvicida given its name. The presence of a single replicon suggests a potential efficiency in its metabolic processes, which could be advantageous in its natural habitat. Understanding the specific traits and genomic features of V. bivalvicida str. 605 can have implications for aquaculture, particularly concerning its interactions with bivalves. This strain may provide insights into host-pathogen dynamics, especially in marine environments where it could impact bivalve health. The study of its genomic data could also assist in developing strategies for managing Vibrio-related diseases in shellfish, highlighting the importance of this organism in both ecological and economic contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio bivalvicida
Strain605

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio bivalvicida str. 605
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio bivalvicida strain 605 contig_91, whole genome shotgun

Gene Summary

Adenine Count

1364302 bp

Thymine Count

1377155 bp

Guanine Count

1092615 bp

Cytosine Count

1087697 bp

Genome Length

4922047 bp

Protein-coding Genes

2495 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar basal body-associated protein flilAPB76_10140Not AvailablePositive132664 - 13307115135.7
rhomboid family intramembrane serine protease glpgAPB76_10145Not AvailableNegative133116 - 13394930916.1
thiosulfate sulfurtransferaseAPB76_10150Not AvailableNegative133954 - 13428012097.1
rna polymerase factor sigma-32APB76_10155Not AvailableNegative134733 - 13559032409.5
cell division protein ftsxAPB76_10160Not AvailableNegative135774 - 13674235529.5
cell division atp-binding protein ftseAPB76_10165Not AvailableNegative136732 - 13740625129.4
cell division protein ftsyAPB76_10170Not AvailableNegative137485 - 13867843308.4
16s rrna (guanine(966)-n(2))-methyltransferase rsmdAPB76_10175Not AvailablePositive138887 - 13948922822.3
hypothetical proteinAPB76_10180Not AvailablePositive139500 - 13976610059.1
hypothetical proteinAPB76_10185Not AvailableNegative139813 - 14039721283.4

Displaying genes 121 – 130 of 2495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.