Allosediminivita pacifica str. DSM 29329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Allosediminivita

Description

Allosediminivita pacifica strain DSM 29329 is a notable microbial organism with a single replicon, which suggests a streamlined genetic structure. Its genomic information is accessible under the accession number QBKN00000000.1, providing a reference for researchers interested in this strain's genetic makeup and potential applications. This strain's classification falls within the broader context of microbial diversity, likely contributing to our understanding of specific ecological niches, particularly in marine environments, as indicated by its name. The presence of Allosediminivita pacifica in such habitats may highlight its role in biogeochemical processes, potentially influencing nutrient cycling and microbial interactions within its ecosystem. In summary, Allosediminivita pacifica str. DSM 29329 is characterized by its single replicon and is cataloged under the accession QBKN00000000.1. Its ecological significance likely lies in its unique adaptations to marine environments, which may contribute to our understanding of microbial diversity and functionality in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAllosediminivita
SpeciesAllosediminivita pacifica
StrainDSM 29329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosediminivita pacifica strain DSM 29329 Ga0196855_198, whole

Gene Summary

Adenine Count

817860 bp

Thymine Count

817942 bp

Guanine Count

1610289 bp

Cytosine Count

1598372 bp

Genome Length

4845108 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
secreted proteinC8N44_10117Not AvailableNegative21144 - 2228942621.6
abc-type spermidine/putrescine transport system permease subunit iiC8N44_10118Not AvailableNegative22324 - 2310628085.6
abc-type spermidine/putrescine transport system permease subunit iC8N44_10119Not AvailableNegative23106 - 2397231386.4
regulatory helix-turn-helix lysr family proteinC8N44_10120Not AvailablePositive24057 - 2480326045.8
lysr substrate binding domain-containing proteinC8N44_10121Not AvailablePositive24800 - 250459120.08
d-alanyl-d-alanine carboxypeptidase-like proteinC8N44_10122Not AvailablePositive25240 - 2604628697.9
Trna-metNot AvailableNot AvailablePositive26159 - 26235Not Available
8-oxo-dgtp pyrophosphatase mutt (nudix family)C8N44_10124Not AvailablePositive26642 - 2711817929.6
pit family inorganic phosphate transporterC8N44_10125Not AvailablePositive27147 - 2862850862.2
hypothetical proteinC8N44_10126Not AvailableNegative28732 - 2915714746.2

Displaying genes 41 – 50 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.