Allosediminivita pacifica str. DSM 29329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Allosediminivita

Description

Allosediminivita pacifica strain DSM 29329 is a notable microbial organism with a single replicon, which suggests a streamlined genetic structure. Its genomic information is accessible under the accession number QBKN00000000.1, providing a reference for researchers interested in this strain's genetic makeup and potential applications. This strain's classification falls within the broader context of microbial diversity, likely contributing to our understanding of specific ecological niches, particularly in marine environments, as indicated by its name. The presence of Allosediminivita pacifica in such habitats may highlight its role in biogeochemical processes, potentially influencing nutrient cycling and microbial interactions within its ecosystem. In summary, Allosediminivita pacifica str. DSM 29329 is characterized by its single replicon and is cataloged under the accession QBKN00000000.1. Its ecological significance likely lies in its unique adaptations to marine environments, which may contribute to our understanding of microbial diversity and functionality in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAllosediminivita
SpeciesAllosediminivita pacifica
StrainDSM 29329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosediminivita pacifica strain DSM 29329 Ga0196855_198, whole

Gene Summary

Adenine Count

817860 bp

Thymine Count

817942 bp

Guanine Count

1610289 bp

Cytosine Count

1598372 bp

Genome Length

4845108 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb9C8N44_1626Not AvailablePositive4747635 - 474861235060.8
type iv secretion system protein virb10C8N44_1627Not AvailablePositive4748609 - 474973039020.5
hypothetical proteinC8N44_1628Not AvailablePositive4749733 - 47499728709.7
type iv secretion system protein vird4C8N44_1631Not AvailablePositive4750100 - 475174060790.4
hypothetical proteinC8N44_1632Not AvailablePositive4751743 - 475217115766.9
manganese transport proteinC8N44_1633Not AvailableNegative4752416 - 475370245632.2
dtxr family iron (metal) dependent repressorC8N44_1634Not AvailablePositive4753887 - 475432716190.3
type iv secretion system protein virb11C8N44_1635Not AvailablePositive4754785 - 475578335067.5
type iv secretion system protein virb2C8N44_1636Not AvailablePositive4755780 - 475611211522.2
type iv secretion system protein virb3C8N44_1637Not AvailablePositive4756112 - 47563939817.27

Displaying genes 4581 – 4590 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.