Allosediminivita pacifica str. DSM 29329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Allosediminivita

Description

Allosediminivita pacifica strain DSM 29329 is a notable microbial organism with a single replicon, which suggests a streamlined genetic structure. Its genomic information is accessible under the accession number QBKN00000000.1, providing a reference for researchers interested in this strain's genetic makeup and potential applications. This strain's classification falls within the broader context of microbial diversity, likely contributing to our understanding of specific ecological niches, particularly in marine environments, as indicated by its name. The presence of Allosediminivita pacifica in such habitats may highlight its role in biogeochemical processes, potentially influencing nutrient cycling and microbial interactions within its ecosystem. In summary, Allosediminivita pacifica str. DSM 29329 is characterized by its single replicon and is cataloged under the accession QBKN00000000.1. Its ecological significance likely lies in its unique adaptations to marine environments, which may contribute to our understanding of microbial diversity and functionality in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAllosediminivita
SpeciesAllosediminivita pacifica
StrainDSM 29329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosediminivita pacifica strain DSM 29329 Ga0196855_198, whole

Gene Summary

Adenine Count

817860 bp

Thymine Count

817942 bp

Guanine Count

1610289 bp

Cytosine Count

1598372 bp

Genome Length

4845108 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oligogalacturonide transport system permease proteinC8N44_11949Not AvailableNegative3148266 - 314915033361.0
alpha-galactosidaseC8N44_11950Not AvailableNegative3149150 - 315058350909.7
arac family transcriptional regulatorC8N44_11951Not AvailablePositive3150705 - 315157133158.9
fructuronate reductaseC8N44_11952Not AvailableNegative3152066 - 315350251435.9
2-deoxy-d-gluconate 3-dehydrogenaseC8N44_11953Not AvailableNegative3153492 - 315423825572.4
4-deoxy-l-threo-5-hexosulose-uronate ketol-isomeraseC8N44_11954Not AvailableNegative3154235 - 315505930183.0
glucuronate isomeraseC8N44_11955Not AvailableNegative3155100 - 315650651908.9
gntr family transcriptional regulatorC8N44_11956Not AvailablePositive3156620 - 315731226003.8
2-keto-3-deoxygluconate kinaseC8N44_11957Not AvailablePositive3157309 - 315819631427.4
lysophospholipase l1-like esteraseC8N44_11958Not AvailablePositive3158261 - 315889921987.4

Displaying genes 3011 – 3020 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.