Allosediminivita pacifica str. DSM 29329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Allosediminivita

Description

Allosediminivita pacifica strain DSM 29329 is a notable microbial organism with a single replicon, which suggests a streamlined genetic structure. Its genomic information is accessible under the accession number QBKN00000000.1, providing a reference for researchers interested in this strain's genetic makeup and potential applications. This strain's classification falls within the broader context of microbial diversity, likely contributing to our understanding of specific ecological niches, particularly in marine environments, as indicated by its name. The presence of Allosediminivita pacifica in such habitats may highlight its role in biogeochemical processes, potentially influencing nutrient cycling and microbial interactions within its ecosystem. In summary, Allosediminivita pacifica str. DSM 29329 is characterized by its single replicon and is cataloged under the accession QBKN00000000.1. Its ecological significance likely lies in its unique adaptations to marine environments, which may contribute to our understanding of microbial diversity and functionality in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAllosediminivita
SpeciesAllosediminivita pacifica
StrainDSM 29329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosediminivita pacifica strain DSM 29329 Ga0196855_198, whole

Gene Summary

Adenine Count

817860 bp

Thymine Count

817942 bp

Guanine Count

1610289 bp

Cytosine Count

1598372 bp

Genome Length

4845108 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heterotetrameric sarcosine oxidase alpha subunitC8N44_11674Not AvailableNegative2853428 - 2856448108626.0
heterotetrameric sarcosine oxidase delta subunitC8N44_11675Not AvailableNegative2856564 - 285689312479.6
hypothetical proteinC8N44_11676Not AvailableNegative2856963 - 285728310024.2
heterotetrameric sarcosine oxidase beta subunitC8N44_11677Not AvailableNegative2857378 - 285862245101.1
cytochrome c-type biogenesis protein ccmhC8N44_11678Not AvailablePositive2858799 - 286004644438.6
putative holliday junction resolvaseC8N44_11679Not AvailablePositive2860043 - 286052217383.0
hypothetical proteinC8N44_11680Not AvailablePositive2860573 - 28608159111.1
hypothetical proteinC8N44_11681Not AvailableNegative2860837 - 286162228539.9
pp_02714C8N44_11682Not AvailableNegative2861619 - 2862566Not Available
phage integrase family proteinC8N44_11683Not AvailablePositive2862746 - 286381641220.6

Displaying genes 2741 – 2750 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.