Allosediminivita pacifica str. DSM 29329

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Allosediminivita

Description

Allosediminivita pacifica strain DSM 29329 is a notable microbial organism with a single replicon, which suggests a streamlined genetic structure. Its genomic information is accessible under the accession number QBKN00000000.1, providing a reference for researchers interested in this strain's genetic makeup and potential applications. This strain's classification falls within the broader context of microbial diversity, likely contributing to our understanding of specific ecological niches, particularly in marine environments, as indicated by its name. The presence of Allosediminivita pacifica in such habitats may highlight its role in biogeochemical processes, potentially influencing nutrient cycling and microbial interactions within its ecosystem. In summary, Allosediminivita pacifica str. DSM 29329 is characterized by its single replicon and is cataloged under the accession QBKN00000000.1. Its ecological significance likely lies in its unique adaptations to marine environments, which may contribute to our understanding of microbial diversity and functionality in these ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusAllosediminivita
SpeciesAllosediminivita pacifica
StrainDSM 29329

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosediminivita pacifica strain DSM 29329 Ga0196855_198, whole

Gene Summary

Adenine Count

817860 bp

Thymine Count

817942 bp

Guanine Count

1610289 bp

Cytosine Count

1598372 bp

Genome Length

4845108 bp

Protein-coding Genes

4611 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc-type spermidine/putrescine transport system permease subunit iiC8N44_11377Not AvailableNegative2470269 - 247106929364.4
abc-type spermidine/putrescine transport system permease subunit iC8N44_11378Not AvailableNegative2471062 - 247196133529.0
spermidine/putrescine abc transporter atp-binding subunitC8N44_11379Not AvailableNegative2471966 - 247304239183.7
sugar lactone lactonase yvreC8N44_11380Not AvailableNegative2473377 - 247425531953.6
uncharacterized protein (duf849 family)C8N44_11381Not AvailableNegative2474282 - 247520833971.5
3-hydroxyacyl-coa dehydrogenaseC8N44_11382Not AvailableNegative2475211 - 247615534042.7
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C8N44_11383Not AvailableNegative2476152 - 247694627377.8
ribose transport system permease proteinC8N44_11384Not AvailableNegative2476958 - 247901870757.6
monosaccharide abc transporter atp-binding protein (cut2 family)C8N44_11385Not AvailableNegative2479015 - 248058655655.6
monosaccharide abc transporter substrate-binding protein (cut2 family)C8N44_11386Not AvailableNegative2480655 - 248177339144.0

Displaying genes 2391 – 2400 of 4679 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.