Nitrospina gracilis 3/211

Kingdom

Pseudomonadati

Phylum

Nitrospinota

Class

Nitrospinia

Order

Nitrospinales

Family

Nitrospinaceae

Genus

Nitrospina

Description

Nitrospina gracilis 3/211 is characterized by having a single replicon, a notable trait that contributes to its genomic structure and stability. This organism is cataloged under the accession number CAQJ00000000.1, which serves as a reference for its genetic material in databases. As a member of the Nitrospina genus, Nitrospina gracilis plays a crucial role in the nitrogen cycle, particularly in the process of nitrification. This process is essential for the conversion of ammonia into nitrite and subsequently into nitrate, facilitating nutrient availability in aquatic environments. The presence of Nitrospina species in marine ecosystems indicates a significant contribution to nitrogen transformation, which is vital for maintaining ecological balance and supporting marine life. The single replicon structure suggests a streamlined genomic organization that may enhance its adaptability and efficiency in nutrient processing. This trait could be advantageous in fluctuating environmental conditions, allowing Nitrospina gracilis to thrive in diverse marine habitats. In summary, the single replicon of Nitrospina gracilis 3/211 underscores its potential efficiency in nitrogen cycling, making it a key player in marine biogeochemical processes. Understanding its genetic and functional traits may provide insights into the dynamics of nitrogen metabolism in marine ecosystems and the broader implications for nutrient cycling in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumNitrospinota
ClassNitrospinia
OrderNitrospinales
FamilyNitrospinaceae
GenusNitrospina
SpeciesNitrospina gracilis
Strain3/211

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrospina gracilis 3/211 WGS project CAQJ00000000 data, contig

Gene Summary

Adenine Count

677711 bp

Thymine Count

665403 bp

Guanine Count

862688 bp

Cytosine Count

861411 bp

Genome Length

3067213 bp

Protein-coding Genes

2962 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-glucose 4,6-dehydrataseNITGR_10020Not AvailablePositive23817 - 2487839293.4
glucose-1-phosphate thymidylyltransferaseNITGR_10021Not AvailablePositive24889 - 2581534673.6
dtdp-4-dehydrorhamnose reductase subunit, nad(p)-binding, of dtdp-l-rhamnose synthaseNITGR_10022Not AvailablePositive25812 - 2674434236.5
gdp-mannose 4,6-dehydrataseNITGR_10025Not AvailablePositive27710 - 2871137528.6
gdp-mannose 4,6-dehydrataseNITGR_10026Not AvailablePositive28758 - 2982539823.4
conserved membrane hypothetical proteinNITGR_10027Not AvailableNegative29832 - 3021514623.4
hypothetical proteinNITGR_10028Not AvailableNegative30403 - 304923377.45
hypothetical proteinNITGR_10029Not AvailablePositive30548 - 3168742402.8
putative diguanylate phosphodiesterase (fragment)NITGR_10030Not AvailablePositive31584 - 3268741333.1
hypothetical proteinNITGR_10031Not AvailableNegative32680 - 3339028013.3

Displaying genes 21 – 30 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.