Nitrospina gracilis 3/211

Kingdom

Pseudomonadati

Phylum

Nitrospinota

Class

Nitrospinia

Order

Nitrospinales

Family

Nitrospinaceae

Genus

Nitrospina

Description

Nitrospina gracilis 3/211 is characterized by having a single replicon, a notable trait that contributes to its genomic structure and stability. This organism is cataloged under the accession number CAQJ00000000.1, which serves as a reference for its genetic material in databases. As a member of the Nitrospina genus, Nitrospina gracilis plays a crucial role in the nitrogen cycle, particularly in the process of nitrification. This process is essential for the conversion of ammonia into nitrite and subsequently into nitrate, facilitating nutrient availability in aquatic environments. The presence of Nitrospina species in marine ecosystems indicates a significant contribution to nitrogen transformation, which is vital for maintaining ecological balance and supporting marine life. The single replicon structure suggests a streamlined genomic organization that may enhance its adaptability and efficiency in nutrient processing. This trait could be advantageous in fluctuating environmental conditions, allowing Nitrospina gracilis to thrive in diverse marine habitats. In summary, the single replicon of Nitrospina gracilis 3/211 underscores its potential efficiency in nitrogen cycling, making it a key player in marine biogeochemical processes. Understanding its genetic and functional traits may provide insights into the dynamics of nitrogen metabolism in marine ecosystems and the broader implications for nutrient cycling in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumNitrospinota
ClassNitrospinia
OrderNitrospinales
FamilyNitrospinaceae
GenusNitrospina
SpeciesNitrospina gracilis
Strain3/211

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrospina gracilis 3/211 WGS project CAQJ00000000 data, contig

Gene Summary

Adenine Count

677711 bp

Thymine Count

665403 bp

Guanine Count

862688 bp

Cytosine Count

861411 bp

Genome Length

3067213 bp

Protein-coding Genes

2962 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase c26NITGR_290012Not AvailableNegative1245375 - 124618430330.7
periplasmic binding proteinNITGR_290013Not AvailableNegative1246375 - 124718730108.3
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferaseNITGR_290014Not AvailableNegative1247184 - 124828437811.6
cob(i)yrinic acid a,c-diamide adenosyltransferaseNITGR_290015Not AvailableNegative1248284 - 124883820801.3
putative cobyrinic acid a,c-diamide synthaseNITGR_290016Not AvailableNegative1248835 - 125024452098.0
putative vitamin b12 transporter btubNITGR_290017Not AvailableNegative1250303 - 125215068857.9
fused bifunctional adenosylcobalamin biosynthesis protein cobu/cob(ii)yrinic acid a,c-diamide reductase (modular protein)NITGR_290018Not AvailableNegative1252540 - 125376645253.3
putative cobalamin synthaseNITGR_290019Not AvailableNegative1253763 - 125453626791.4
sigma-54 dependent transcriptional regulatorNITGR_290020Not AvailablePositive1255453 - 125650238984.6
conserved hypothetical proteinNITGR_290021Not AvailablePositive1256797 - 12570549835.89

Displaying genes 1251 – 1260 of 3013 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.