Bibersteinia trehalosi USDA-ARS-USMARC-190

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Bibersteinia

Description

Bibersteinia trehalosi USDA-ARS-USMARC-190 is a bacterium characterized by having a single replicon. The genomic data for this strain is accessible under the accession number NZ_CP006956.1. Bibersteinia trehalosi is known for its role in the health of ruminant animals, particularly in relation to respiratory diseases and septicemia in sheep and cattle. This organism is part of the broader family of Pasteurellaceae, which are often associated with pathogenicity in various animal hosts. The single replicon structure suggests a streamlined genomic organization, which may contribute to its adaptability and survival in host environments. Understanding the genomic features of Bibersteinia trehalosi can provide insights into its ecological role and interactions within the microbiome of ruminants. The presence of specific genes associated with virulence and survival in host tissues can be further explored through genomic analysis. This knowledge may inform strategies for managing infections in livestock and improving animal health outcomes. Moreover, the study of this bacterium can contribute to the understanding of microbial dynamics in agricultural settings, where the health of ruminants is crucial for livestock productivity and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusBibersteinia
SpeciesBibersteinia trehalosi
StrainUSDA-ARS-USMARC-190

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bibersteinia trehalosi USDA-ARS-USMARC-190 chromosome, complete

Gene Summary

Adenine Count

722220 bp

Thymine Count

717501 bp

Guanine Count

502631 bp

Cytosine Count

500817 bp

Genome Length

2443169 bp

Protein-coding Genes

2162 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna ligaseF544_RS08090Not AvailableNegative1778551 - 177936931013.3
duf5358 family proteinF544_RS08095Not AvailablePositive1779505 - 177995717253.7
leucyl aminopeptidaseF544_RS08100Not AvailableNegative1779988 - 178146352878.2
lps export abc transporter permease lptfF544_RS08105Not AvailablePositive1781633 - 178273340487.9
lps export abc transporter permease lptgF544_RS08110Not AvailablePositive1782738 - 178380839433.8
dna polymerase iii subunit alphaF544_RS08115Not AvailablePositive1783839 - 1787315129785.0
o-antigen ligase family proteinF544_RS08120Not AvailablePositive1787371 - 178861847238.2
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseF544_RS08125Not AvailablePositive1788619 - 178989948693.0
pantetheine-phosphate adenylyltransferaseF544_RS08130Not AvailablePositive1789902 - 179037817823.7
oligoribonucleaseF544_RS08135Not AvailablePositive1790404 - 179096721768.3

Displaying genes 1691 – 1700 of 2288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.