Bibersteinia trehalosi USDA-ARS-USMARC-190

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Bibersteinia

Description

Bibersteinia trehalosi USDA-ARS-USMARC-190 is a bacterium characterized by having a single replicon. The genomic data for this strain is accessible under the accession number NZ_CP006956.1. Bibersteinia trehalosi is known for its role in the health of ruminant animals, particularly in relation to respiratory diseases and septicemia in sheep and cattle. This organism is part of the broader family of Pasteurellaceae, which are often associated with pathogenicity in various animal hosts. The single replicon structure suggests a streamlined genomic organization, which may contribute to its adaptability and survival in host environments. Understanding the genomic features of Bibersteinia trehalosi can provide insights into its ecological role and interactions within the microbiome of ruminants. The presence of specific genes associated with virulence and survival in host tissues can be further explored through genomic analysis. This knowledge may inform strategies for managing infections in livestock and improving animal health outcomes. Moreover, the study of this bacterium can contribute to the understanding of microbial dynamics in agricultural settings, where the health of ruminants is crucial for livestock productivity and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusBibersteinia
SpeciesBibersteinia trehalosi
StrainUSDA-ARS-USMARC-190

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bibersteinia trehalosi USDA-ARS-USMARC-190 chromosome, complete

Gene Summary

Adenine Count

722220 bp

Thymine Count

717501 bp

Guanine Count

502631 bp

Cytosine Count

500817 bp

Genome Length

2443169 bp

Protein-coding Genes

2162 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-octaprenyl-6-methoxyphenyl hydroxylaseF544_RS06985Not AvailablePositive1533155 - 153434843592.8
crossover junction endodeoxyribonuclease ruvcF544_RS06990Not AvailableNegative1534383 - 153496120832.4
yebc/pmpr family dna-binding transcriptional regulatorF544_RS06995Not AvailableNegative1535039 - 153577926256.9
dihydroneopterin triphosphate diphosphataseF544_RS07000Not AvailableNegative1535822 - 153625916722.9
trna pseudouridine(38-40) synthase truaF544_RS07005Not AvailableNegative1536261 - 153704629823.5
gtp cyclohydrolase i foleF544_RS07010Not AvailableNegative1537046 - 153770224957.2
3-deoxy-d-manno-octulosonic acid kinaseF544_RS07015Not AvailablePositive1537817 - 153851827756.2
sigma-e factor negative regulatory proteinF544_RS07020Not AvailableNegative1538564 - 153916322138.1
rna polymerase sigma factor rpoeF544_RS07025Not AvailableNegative1539190 - 153976521820.0
apolipoprotein n-acyltransferaseF544_RS07030Not AvailableNegative1539895 - 154141556973.6

Displaying genes 1471 – 1480 of 2288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.