Bibersteinia trehalosi USDA-ARS-USMARC-190

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Bibersteinia

Description

Bibersteinia trehalosi USDA-ARS-USMARC-190 is a bacterium characterized by having a single replicon. The genomic data for this strain is accessible under the accession number NZ_CP006956.1. Bibersteinia trehalosi is known for its role in the health of ruminant animals, particularly in relation to respiratory diseases and septicemia in sheep and cattle. This organism is part of the broader family of Pasteurellaceae, which are often associated with pathogenicity in various animal hosts. The single replicon structure suggests a streamlined genomic organization, which may contribute to its adaptability and survival in host environments. Understanding the genomic features of Bibersteinia trehalosi can provide insights into its ecological role and interactions within the microbiome of ruminants. The presence of specific genes associated with virulence and survival in host tissues can be further explored through genomic analysis. This knowledge may inform strategies for managing infections in livestock and improving animal health outcomes. Moreover, the study of this bacterium can contribute to the understanding of microbial dynamics in agricultural settings, where the health of ruminants is crucial for livestock productivity and sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusBibersteinia
SpeciesBibersteinia trehalosi
StrainUSDA-ARS-USMARC-190

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bibersteinia trehalosi USDA-ARS-USMARC-190 chromosome, complete

Gene Summary

Adenine Count

722220 bp

Thymine Count

717501 bp

Guanine Count

502631 bp

Cytosine Count

500817 bp

Genome Length

2443169 bp

Protein-coding Genes

2162 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc abc transporter permease subunit znubF544_RS05230Not AvailableNegative1112868 - 111365328244.0
zinc abc transporter atp-binding protein znucF544_RS05235Not AvailableNegative1113662 - 111446229732.0
murein dd-endopeptidase mepmF544_RS05240Not AvailablePositive1114600 - 111617158548.9
bifunctional protein-disulfide isomerase/oxidoreductase dsbcF544_RS05245Not AvailablePositive1116188 - 111687125234.7
single-stranded-dna-specific exonuclease recjF544_RS05250Not AvailablePositive1116983 - 111870163510.1
ompa family proteinF544_RS05255Not AvailablePositive1118830 - 111968431302.8
pyridoxal phosphataseF544_RS05260Not AvailablePositive1119747 - 112056230069.8
4-hydroxy-tetrahydrodipicolinate synthaseF544_RS05265Not AvailablePositive1120679 - 112156631513.1
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase foldF544_RS05270Not AvailableNegative1121610 - 112246130632.4
Trna-proNot AvailableNot AvailablePositive1122686 - 1122762Not Available

Displaying genes 1121 – 1130 of 2288 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.