Microbacterium sp. SA39

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. SA39 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a relatively simple genomic structure. The unique accession number for this strain is JXRU00000000.1, which facilitates its identification and classification within microbial databases. Microbacterium species are generally known for their versatility in various environments, including soil and aquatic systems. They are often involved in the decomposition of organic matter, playing a crucial role in nutrient cycling. Although specific ecological roles of Microbacterium sp. SA39 have not been detailed, the characteristics of its genus suggest it may contribute to the breakdown of complex organic compounds, thus influencing the microbial community structure and dynamics in its habitat. The rod shape of Microbacterium sp. SA39 may also confer certain advantages in terms of motility and surface adherence, potentially allowing it to colonize diverse environments more effectively. Overall, the traits of Microbacterium sp. SA39 indicate that it is likely to play a significant role in its ecosystem, particularly in processes related to organic matter degradation and nutrient availability. Further studies would be beneficial to elucidate its specific functions and interactions within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. SA39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. SA39 RS85_contig000039, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3732 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRS85_03494Not AvailableNegative3560605 - 356159137050.8
hypothetical proteinRS85_03495Not AvailablePositive3561619 - 356229024153.1
toxin relgRS85_03496Not AvailableNegative3562311 - 356258910609.8
antitoxin relfRS85_03497Not AvailableNegative3562586 - 356286710395.2
hypothetical proteinRS85_03498Not AvailablePositive3563001 - 356330611044.8
leucine-responsive regulatory proteinRS85_03499Not AvailableNegative3563421 - 356400821111.4
putative d,d-dipeptide-binding periplasmic protein ddpa precursorRS85_03500Not AvailablePositive3564160 - 356574654666.4
putative d,d-dipeptide transport system permease protein ddpbRS85_03501Not AvailablePositive3565758 - 356681937469.6
nickel transport system permease protein nikcRS85_03502Not AvailablePositive3566816 - 356772432156.8
oligopeptide transport atp-binding protein oppdRS85_03503Not AvailablePositive3567721 - 356858130491.9

Displaying genes 3481 – 3490 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.