Microbacterium sp. SA39

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. SA39 is characterized as a rod-shaped bacterium and possesses a single replicon, indicating a relatively simple genomic structure. The unique accession number for this strain is JXRU00000000.1, which facilitates its identification and classification within microbial databases. Microbacterium species are generally known for their versatility in various environments, including soil and aquatic systems. They are often involved in the decomposition of organic matter, playing a crucial role in nutrient cycling. Although specific ecological roles of Microbacterium sp. SA39 have not been detailed, the characteristics of its genus suggest it may contribute to the breakdown of complex organic compounds, thus influencing the microbial community structure and dynamics in its habitat. The rod shape of Microbacterium sp. SA39 may also confer certain advantages in terms of motility and surface adherence, potentially allowing it to colonize diverse environments more effectively. Overall, the traits of Microbacterium sp. SA39 indicate that it is likely to play a significant role in its ecosystem, particularly in processes related to organic matter degradation and nutrient availability. Further studies would be beneficial to elucidate its specific functions and interactions within its ecological niche.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. SA39
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. SA39 RS85_contig000039, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3732 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribbon-helix-helix protein, copg familyRS85_01071Not AvailableNegative1072597 - 10728609406.02
putative atp-dependent dna ligase ykouRS85_01072Not AvailableNegative1072899 - 107396939551.4
hypothetical proteinRS85_01073Not AvailableNegative1074013 - 107516739873.1
atp-dependent dna helicase uvrd1RS85_01074Not AvailableNegative1075196 - 107765589679.3
hypothetical proteinRS85_01075Not AvailableNegative1077758 - 1080895107443.0
inner membrane protein yccfRS85_01076Not AvailablePositive1080909 - 108142719103.2
glycerophosphoryl diester phosphodiesterase precursorRS85_01077Not AvailableNegative1081521 - 108253736904.6
bax inhibitor 1 like proteinRS85_01078Not AvailablePositive1082598 - 108350932218.9
hypothetical proteinRS85_01079Not AvailablePositive1083674 - 10839469367.0
putative ecf rna polymerase sigma factor sigiRS85_01080Not AvailableNegative1084031 - 108531746325.6

Displaying genes 1071 – 1080 of 3786 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.