Clostridium sp. CAG:505 str. MGS:505

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. CAG:505 str. MGS:505 is characterized by having a single replicon, which is significant in understanding its genetic structure and replication mechanisms. The strain is identified with the accession number CBHJ000000000.1, which is essential for referencing its genomic data in scientific literature and databases. In terms of its ecological role, Clostridium species are generally known for their capabilities in anaerobic environments, where they contribute to various biochemical processes, including fermentation and the breakdown of organic materials. This specific strain, while not characterized in detail here, likely shares similar ecological functions typical of Clostridium, such as participating in the carbon cycle and influencing soil health. The presence of a single replicon suggests a streamlined genetic organization, which may contribute to the organism's adaptability and efficiency in its ecological niche. This simplicity can be advantageous in environments where rapid growth and resource utilization are crucial for survival. Thus, understanding the genetic and ecological characteristics of Clostridium sp. CAG:505 str. MGS:505 can provide insights into its role within microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. CAG:505
StrainMGS:505

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. CAG:505 WGS project CBHJ01000000 data, contig,

Gene Summary

Adenine Count

576451 bp

Thymine Count

584899 bp

Guanine Count

478940 bp

Cytosine Count

498119 bp

Genome Length

2138452 bp

Protein-coding Genes

2073 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Bacteriophage spbeta n-acetylmuramoyl-l-alanine amidaseBN684_01878Not AvailableNegative1437313 - 143852746440.6
unknownBN684_00001Not AvailableNegative100 - 3579789.48
unknownBN684_00002Not AvailableNegative360 - 62010074.2
rna binding s1 domain proteinBN684_00023Not AvailableNegative852 - 113911123.2
putative uncharacterized proteinBN684_00530Not AvailableNegative1296 - 201525697.1
putative uncharacterized proteinBN684_00531Not AvailableNegative2012 - 338251879.5
putative uncharacterized proteinBN684_00532Not AvailableNegative3488 - 403620590.2
glycerol dehydrogenaseBN684_00533Not AvailableNegative4112 - 520340660.6
elongation factor 4BN684_00534Not AvailableNegative5497 - 585013385.7
putative uncharacterized proteinBN684_00535Not AvailableNegative6110 - 690431307.2

Displaying genes 21 – 30 of 2124 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

251 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 251 metabolites

Health Effects

No health effects information available for this bacterium.