Clostridium sp. CAG:230 str. MGS:230

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. CAG:230 str. MGS:230 is characterized by having a single replicon, which is indicative of its genetic organization. The genomic data for this strain is available under the accession number CBCQ000000000.1. Clostridium species are known for their anaerobic metabolism and are often found in environments devoid of oxygen, such as soil, sediments, and the intestines of animals. This particular strain may share similar ecological niches, contributing to the cycling of nutrients in anaerobic environments. Further research into Clostridium sp. CAG:230 str. MGS:230 could provide insights into its role in biogeochemical processes, such as organic matter decomposition and the nitrogen cycle. Understanding the specific metabolic pathways and environmental interactions of this strain could enhance our knowledge of microbial ecology and the functional diversity of Clostridia in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. CAG:230
StrainMGS:230

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. CAG:230 WGS project CBCQ01000000 data, contig,

Gene Summary

Adenine Count

817745 bp

Thymine Count

818582 bp

Guanine Count

523327 bp

Cytosine Count

511648 bp

Genome Length

2671381 bp

Protein-coding Genes

2202 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
histidine kinase-dna gyrase b-and hsp90-like atpase./histidine kinase./hamp domainBN547_01391Not AvailableNegative941416 - 94318267731.6
putative uncharacterized proteinBN547_01392Not AvailableNegative943257 - 94360113034.8
conserved protein/domain typically associated with flavoprotein oxygenases dim6/ntab familyBN547_01393Not AvailablePositive943787 - 94438622516.1
atp-dependent endonuclease of the old family-like proteinBN547_01394Not AvailablePositive944506 - 94636573073.5
isoprenyl transferaseBN547_01395Not AvailablePositive948427 - 94914027296.6
phosphatidate cytidylyltransferaseBN547_01396Not AvailablePositive949165 - 94995629246.8
1-deoxy-d-xylulose 5-phosphate reductoisomeraseBN547_01397Not AvailablePositive949975 - 95111741780.2
rip metalloprotease rsepBN547_01398Not AvailablePositive951142 - 95249749838.5
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseBN547_01399Not AvailablePositive952790 - 95386338000.7
n-acetylmuramoyl-l-alanine amidaseBN547_00090Not AvailablePositive956669 - 95695910593.3

Displaying genes 791 – 800 of 2243 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

9 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0003333(2R)-3-phosphoglycerateC3H4O7PChemical structure of (2R)-3-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003346(2R)-2-phosphoglycerateC3H4O7PChemical structure of (2R)-2-phosphoglycerateNot available
Average183.033Da
Monoisotopic182.9711102Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0004925UDP-N-acetyl-alpha-D-muramateC20H28N3O19P2Chemical structure of UDP-N-acetyl-alpha-D-muramateNot available
Average676.395Da
Monoisotopic676.080870429Da
BASm00050533',3'-c-di-AMPC20H22N10O12P2Chemical structure of 3',3'-c-di-AMPNot available
Average656.403Da
Monoisotopic656.0904873Da

Displaying 1–9 of 9 metabolites

Health Effects

No health effects information available for this bacterium.